Aliases for MRGPRG-AS1 Gene

Subcategory (RNA class) for MRGPRG-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for MRGPRG-AS1 Gene

  • MRGPRG Antisense RNA 1 2 3 4 5
  • MRGPRG Antisense RNA 1 (Non-Protein Coding) 2 3
  • MRGPRG-AS1 2 5
  • C11orf36 3 4
  • HSD-40 2 3
  • Putative Uncharacterized Protein MRGPRG-AS1 4
  • Chromosome 11 Open Reading Frame 36 2
  • MRGPRG Antisense Gene Protein 1 4
  • NONHSAG007453.2 91
  • Lnc-SLC22A18-9 165
  • HSALNG0082278 164
  • FLJ36102 2

External Ids for MRGPRG-AS1 Gene

Previous HGNC Symbols for MRGPRG-AS1 Gene

  • C11orf36

Previous GeneCards Identifiers for MRGPRG-AS1 Gene

  • GC11P003240

Summaries for MRGPRG-AS1 Gene

GeneCards Summary for MRGPRG-AS1 Gene

MRGPRG-AS1 (MRGPRG Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with MRGPRG-AS1 include Inflammatory Bowel Disease 10 and Hypoparathyroidism, Sensorineural Deafness, And Renal Disease.

Additional gene information for MRGPRG-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MRGPRG-AS1 Gene

Genomics for MRGPRG-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MRGPRG-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J003217 Enhancer 1 Ensembl ENCODE 600.7 -0.9 -936 0.8 CTCF ZNF512 ZNF692 MTA2 PKNOX1 MTA1 PATZ1 REST RAD21 HDAC1 MG828482 MRGPRG MRGPRG-AS1 OSBPL5
GH11J003218 Promoter 0.3 EPDnew 600.7 +0.0 26 0.1 MRGPRG MRGPRG-AS1 OSBPL5
GH11J003000 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 9.9 -217.3 -217331 2.4 FOXA1 ZIC2 POLR2A ZNF600 ZNF341 ZBTB44 ZBTB20 ESR1 ZBTB48 ZNF217 NAP1L4 CARS1-AS1 CARS1 SNORA54 RNU1-91P ENSG00000224513 PHLDA2 SLC22A18 MRGPRG MRGPRG-AS1
GH11J003136 Enhancer 1 Ensembl ENCODE dbSUPER 10.9 -81.5 -81468 7.9 CTCF PRDM10 KDM1A ZIC2 SCRT2 MNT ZNF316 BCOR SPI1 GABPA OSBPL5 MRGPRG MRGPRG-AS1 ENSG00000224513 MN309223 lnc-CARS-3 lnc-SLC22A18-7 LOC107987158 CARS1
GH11J003339 Enhancer 1 Ensembl ENCODE 10.9 +121.9 121860 1.6 IKZF1 JUND BRD9 ZNF24 DPF2 HDAC1 SOX6 EP300 NRF1 MGA piR-31474-001 ZNF195 TSSC2 ENSG00000224513 MRGPRG MRGPRG-AS1 RNU1-91P NAP1L4 SNORA54 ART1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MRGPRG-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MRGPRG-AS1 Gene

Genomic Locations for MRGPRG-AS1 Gene
chr11:3,218,332-3,223,131
(GRCh38/hg38)
Size:
4,800 bases
Orientation:
Plus strand
chr11:3,239,562-3,244,361
(GRCh37/hg19)
Size:
4,800 bases
Orientation:
Plus strand

Genomic View for MRGPRG-AS1 Gene

Genes around MRGPRG-AS1 on UCSC Golden Path with GeneCards custom track
MRGPRG-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MRGPRG-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRGPRG-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRGPRG-AS1 Gene

Proteins for MRGPRG-AS1 Gene

  • Protein details for MRGPRG-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q2M3A8-MRAS1_HUMAN
    Recommended name:
    Putative uncharacterized protein MRGPRG-AS1
    Protein Accession:
    Q2M3A8
    Secondary Accessions:
    • Q6TF48
    • Q8N7R8
    • Q8N9X7

    Protein attributes for MRGPRG-AS1 Gene

    Size:
    158 amino acids
    Molecular mass:
    16456 Da
    Quaternary structure:
    No Data Available

neXtProt entry for MRGPRG-AS1 Gene

Post-translational modifications for MRGPRG-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRGPRG-AS1 Gene

Domains & Families for MRGPRG-AS1 Gene

Gene Families for MRGPRG-AS1 Gene

Protein Domains for MRGPRG-AS1 Gene

ProtoNet:
genes like me logo Genes that share domains with MRGPRG-AS1: view

No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MRGPRG-AS1 Gene

Function for MRGPRG-AS1 Gene

Phenotypes From GWAS Catalog for MRGPRG-AS1 Gene

Phenotypes for MRGPRG-AS1 Gene

genes like me logo Genes that share phenotypes with MRGPRG-AS1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MRGPRG-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRGPRG-AS1 Gene

Localization for MRGPRG-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRGPRG-AS1 Gene

Pathways & Interactions for MRGPRG-AS1 Gene

PathCards logo

SuperPathways for MRGPRG-AS1 Gene

No Data Available

Interacting Proteins for MRGPRG-AS1 Gene

Selected Interacting proteins: Q2M3A8-MRAS1_HUMAN for MRGPRG-AS1 Gene via IID

Symbol External ID(s) Details
EGFR

Gene Ontology (GO) - Biological Process for MRGPRG-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRGPRG-AS1 Gene

Drugs & Compounds for MRGPRG-AS1 Gene

No Compound Related Data Available

Transcripts for MRGPRG-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MRGPRG-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000020E505_9606 lncRNA 1790 4

HGNC: 26691,

RefSeq: NR_027138,

Ensembl: ENST00000434798 (view in UCSC) ,

NONCODE: NONHSAT017563.2,

URS0000346E97_9606 lncRNA 554 3

Ensembl: ENST00000531711 (view in UCSC) ,

LncBook: HSALNT0171275,

NONCODE: NONHSAT017564.2,

URS00005025DB_9606 lncRNA 1818 2

Ensembl: ENST00000420873 (view in UCSC) ,

NONCODE: NONHSAT017565.2,

URS00008BEC70_9606 lncRNA 693 1

LNCipedia: lnc-SLC22A18-9:1,

MRGPRG-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MRGPRG-AS1 Gene

1 REFSEQ mRNAs :
5 NCBI additional mRNA sequence :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MRGPRG-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for MRGPRG-AS1 Gene

No ASD Table

Relevant External Links for MRGPRG-AS1 Gene

GeneLoc Exon Structure for
MRGPRG-AS1

Expression for MRGPRG-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MRGPRG-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MRGPRG-AS1 Gene

This gene is overexpressed in Testis (x52.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MRGPRG-AS1

SOURCE GeneReport for Unigene cluster for MRGPRG-AS1 Gene:

Hs.151154
genes like me logo Genes that share expression patterns with MRGPRG-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRGPRG-AS1 Gene

Orthologs for MRGPRG-AS1 Gene

Evolution for MRGPRG-AS1 Gene

ENSEMBL:
Gene Tree for MRGPRG-AS1 (if available)
TreeFam:
Gene Tree for MRGPRG-AS1 (if available)

No data available for Orthologs for MRGPRG-AS1 Gene

Paralogs for MRGPRG-AS1 Gene

No data available for Paralogs for MRGPRG-AS1 Gene

Variants for MRGPRG-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for MRGPRG-AS1 Gene

SNP ID Clinical significance and condition Chr 11 pos Variation AA Info Type
rs11026002 - p.Glu6Ala
rs11026004 - p.Ser135Phe
rs12280457 - p.Gly142Val

Additional dbSNP identifiers (rs#s) for MRGPRG-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MRGPRG-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv176e214 CNV gain 21293372
dgv19e180 CNV loss 20482838
dgv574n106 CNV deletion 24896259
esv2678047 CNV deletion 23128226
esv27427 CNV loss 19812545
esv2744033 CNV deletion 23290073
esv2759796 CNV gain+loss 17122850
esv3259052 CNV deletion 24192839
esv33102 CNV loss 17666407
esv3547230 CNV deletion 23714750
esv3625135 CNV loss 21293372
esv3891908 CNV loss 25118596
esv992308 CNV deletion 20482838
nsv428245 CNV gain 18775914
nsv469931 CNV loss 18288195
nsv517153 CNV loss 19592680
nsv523703 CNV loss 19592680
nsv524468 CNV loss 19592680
nsv553124 CNV loss 21841781
nsv7649 CNV deletion 18451855
nsv8767 CNV loss 18304495
nsv951295 CNV deletion 24416366

Additional Variant Information for MRGPRG-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRGPRG-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRGPRG-AS1 Gene

Disorders for MRGPRG-AS1 Gene

MalaCards: The human disease database

(4) MalaCards diseases for MRGPRG-AS1 Gene - From: DISEASES

Additional Disease Information for MRGPRG-AS1

genes like me logo Genes that share disorders with MRGPRG-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MRGPRG-AS1 Gene

Publications for MRGPRG-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4
  3. A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome. (PMID: 28065597) Yao Z … Stagljar I (Molecular cell 2017) 3
  4. A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene. (PMID: 19490893) Luo J … Elledge SJ (Cell 2009) 3
  5. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4

Products for MRGPRG-AS1 Gene

Sources for MRGPRG-AS1 Gene