Aliases for MRGPRF-AS1 Gene

Subcategory (RNA class) for MRGPRF-AS1 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for MRGPRF-AS1 Gene

  • MRGPRF Antisense RNA 1 2 3 5
  • MRGPRF-AS1 2 170
  • HSALNG0085291 169
  • NONHSAG008874 94

External Ids for MRGPRF-AS1 Gene

Summaries for MRGPRF-AS1 Gene

GeneCards Summary for MRGPRF-AS1 Gene

MRGPRF-AS1 (MRGPRF Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MRGPRF-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MRGPRF-AS1 Gene

Genomics for MRGPRF-AS1 Gene

GeneHancer (GH) Regulatory Elements for MRGPRF-AS1 Gene

Promoters and enhancers for MRGPRF-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MRGPRF-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MRGPRF-AS1 Gene

Genomic Locations for MRGPRF-AS1 Gene
chr11:69,012,283-69,018,448
(GRCh38/hg38)
Size:
6,166 bases
Orientation:
Plus strand
chr11:68,779,751-68,785,915
(GRCh37/hg19)
Size:
6,165 bases
Orientation:
Plus strand

Genomic View for MRGPRF-AS1 Gene

Genes around MRGPRF-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MRGPRF-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MRGPRF-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MRGPRF-AS1 Gene

Proteins for MRGPRF-AS1 Gene

Post-translational modifications for MRGPRF-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MRGPRF-AS1 Gene

Domains & Families for MRGPRF-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MRGPRF-AS1 Gene

Function for MRGPRF-AS1 Gene

Phenotypes From GWAS Catalog for MRGPRF-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MRGPRF-AS1 Gene

Localization for MRGPRF-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MRGPRF-AS1 Gene

Pathways & Interactions for MRGPRF-AS1 Gene

PathCards logo

SuperPathways for MRGPRF-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MRGPRF-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MRGPRF-AS1 Gene

Drugs & Compounds for MRGPRF-AS1 Gene

No Compound Related Data Available

Transcripts for MRGPRF-AS1 Gene

mRNA/cDNA for MRGPRF-AS1 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(10) RNACentral transcripts :
(8) LncBook transcripts :
(6) NONCODE transcripts :
(7) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MRGPRF-AS1 Gene

No ASD Table

Relevant External Links for MRGPRF-AS1 Gene

GeneLoc Exon Structure for
MRGPRF-AS1
ECgene alternative splicing isoforms for
MRGPRF-AS1

Expression for MRGPRF-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MRGPRF-AS1 Gene

genes like me logo Genes that share expression patterns with MRGPRF-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MRGPRF-AS1 Gene

Orthologs for MRGPRF-AS1 Gene

Evolution for MRGPRF-AS1 Gene

ENSEMBL:
Gene Tree for MRGPRF-AS1 (if available)
TreeFam:
Gene Tree for MRGPRF-AS1 (if available)

No data available for Orthologs for MRGPRF-AS1 Gene

Paralogs for MRGPRF-AS1 Gene

No data available for Paralogs for MRGPRF-AS1 Gene

Variants for MRGPRF-AS1 Gene

Sequence variations from dbSNP and Humsavar for MRGPRF-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000005074 -- 69,014,742(+) G/A/T intron_variant
rs1000439978 -- 69,015,004(+) A/G intron_variant
rs1000737094 -- 69,012,962(+) C/T intron_variant
rs1000849518 -- 69,011,059(+) G/C upstream_transcript_variant
rs1001041776 -- 69,016,107(+) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for MRGPRF-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv468619 CNV loss 19166990
nsv527120 CNV loss 19592680
nsv555299 CNV loss 21841781
nsv825970 CNV gain 20364138
nsv832196 CNV loss 17160897

Additional Variant Information for MRGPRF-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MRGPRF-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MRGPRF-AS1 Gene

Disorders for MRGPRF-AS1 Gene

Additional Disease Information for MRGPRF-AS1

No disorders were found for MRGPRF-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MRGPRF-AS1 Gene

Publications for MRGPRF-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 56

No data available for External Links for MRGPRF-AS1 Gene

Products for MRGPRF-AS1 Gene

Sources for MRGPRF-AS1 Gene