MPP7-DT Gene (RNA Gene)

MPP7 Divergent Transcript

GC10P028305
GIFtS:
6

Aliases for MPP7-DT Gene

Subcategory (RNA class) for MPP7-DT Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for MPP7-DT Gene

  • MPP7 Divergent Transcript 2 3 5
  • HSALNG0076890 169
  • Lnc-WAC-3 170

External Ids for MPP7-DT Gene

Summaries for MPP7-DT Gene

GeneCards Summary for MPP7-DT Gene

MPP7-DT (MPP7 Divergent Transcript) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MPP7-DT Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MPP7-DT Gene

Genomics for MPP7-DT Gene

GeneHancer (GH) Regulatory Elements for MPP7-DT Gene

Promoters and enhancers for MPP7-DT Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH10J028301 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas 750.6 -0.4 -361 3.2 SP1 CTCF ZBTB6 RBPJ POLR2A FOS MIXL1 ZNF362 CC2D1A NFYC MPP7-DT MPP7 MIR8086
GH10J028291 Enhancer 0.6 ENCODE 0.4 -10.7 -10713 2.7 MNT ZSCAN21 PRDM1 EGR1 FOSL2 PRDM10 CTBP1 SCRT2 FOS POLR2A MPP7 MIR8086 MPP7-DT
GH10J028315 Enhancer 0.3 Ensembl 0.4 +12.5 12539 0.6 ZNF366 MPP7 piR-46381-012 MPP7-DT
GH10J028294 Enhancer 0.2 ENCODE 0.4 -8.7 -8692 0.6 MPP7 MIR8086 MPP7-DT
GH10J028288 Enhancer 0.2 Ensembl 0.4 -13.7 -13661 1.4 MIR8086 MPP7 MPP7-DT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MPP7-DT on UCSC Golden Path with GeneCards custom track

Genomic Locations for MPP7-DT Gene

Genomic Locations for MPP7-DT Gene
chr10:28,303,162-28,316,335
(GRCh38/hg38)
Size:
13,174 bases
Orientation:
Plus strand

Genomic View for MPP7-DT Gene

Genes around MPP7-DT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MPP7-DT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MPP7-DT Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MPP7-DT Gene

Proteins for MPP7-DT Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MPP7-DT Gene

No Post-translational modifications

No data available for DME Specific Peptides for MPP7-DT Gene

Domains & Families for MPP7-DT Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MPP7-DT Gene

Function for MPP7-DT Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for MPP7-DT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MPP7-DT Gene

Localization for MPP7-DT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MPP7-DT Gene

Pathways & Interactions for MPP7-DT Gene

PathCards logo

SuperPathways for MPP7-DT Gene

No Data Available

Gene Ontology (GO) - Biological Process for MPP7-DT Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MPP7-DT Gene

Drugs & Compounds for MPP7-DT Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MPP7-DT Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MPP7-DT Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(6) RNACentral transcripts :
(1) LncBook transcripts :
(6) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MPP7-DT Gene

No ASD Table

Relevant External Links for MPP7-DT Gene

GeneLoc Exon Structure for
MPP7-DT
ECgene alternative splicing isoforms for
MPP7-DT

Expression for MPP7-DT Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MPP7-DT Gene

Orthologs for MPP7-DT Gene

Evolution for MPP7-DT Gene

ENSEMBL:
Gene Tree for MPP7-DT (if available)
TreeFam:
Gene Tree for MPP7-DT (if available)

No data available for Orthologs for MPP7-DT Gene

Paralogs for MPP7-DT Gene

No data available for Paralogs for MPP7-DT Gene

Variants for MPP7-DT Gene

Sequence variations from dbSNP and Humsavar for MPP7-DT Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000036270 -- 28,304,669(+) T/A intron_variant, non_coding_transcript_variant
rs1000398233 -- 28,303,436(+) C/A/T non_coding_transcript_variant
rs1000409508 -- 28,303,776(+) T/A intron_variant, non_coding_transcript_variant
rs1000736518 -- 28,302,587(+) C/A upstream_transcript_variant
rs1001153462 -- 28,302,772(+) C/T upstream_transcript_variant

Additional Variant Information for MPP7-DT Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MPP7-DT

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MPP7-DT Gene

Disorders for MPP7-DT Gene

No disorders were found for MPP7-DT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MPP7-DT Gene

Publications for MPP7-DT Gene

No publications were found for MPP7-DT Gene.

No data available for External Links for MPP7-DT Gene

Products for MPP7-DT Gene

Sources for MPP7-DT Gene