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Aliases for MORC2-AS1 Gene

Subcategory (RNA class) for MORC2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for MORC2-AS1 Gene

  • MORC2 Antisense RNA 1 2 3 5
  • MORC2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 22 Open Reading Frame 27 2
  • Non-Protein Coding RNA 325 2
  • NCRNA00325 3
  • C22orf27 3

External Ids for MORC2-AS1 Gene

Previous HGNC Symbols for MORC2-AS1 Gene

  • C22orf27
  • NCRNA00325

Previous GeneCards Identifiers for MORC2-AS1 Gene

  • GC22P031319
  • GC22P031323
  • GC22P031325

Summaries for MORC2-AS1 Gene

GeneCards Summary for MORC2-AS1 Gene

MORC2-AS1 (MORC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with MORC2-AS1 include Charcot-Marie-Tooth Disease, Axonal, Type 2Z.

Additional gene information for MORC2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MORC2-AS1 Gene

Genomics for MORC2-AS1 Gene

GeneHancer (GH) Regulatory Elements for MORC2-AS1 Gene

Promoters and enhancers for MORC2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J030920 Promoter/Enhancer 1.3 Ensembl ENCODE 613.8 -0.6 -607 2.6 CTCF POLR2A ZNF687 CREM PRDM1 MLLT1 RAD21 IKZF1 ZBTB33 RXRA MORC2-AS1 EIF4HP2 GC22M030911
GH22J030967 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.5 +46.3 46293 5.2 ZNF652 SP1 ZFX ELF3 MNT CBFA2T2 ZNF148 NKRF POLR2A MLLT1 TUG1 MORC2 SF3A1 PRR14L DEPDC5 SMTN PATZ1 PES1 SFI1 MORC2-AS1
GH22J030944 Enhancer 0.8 Ensembl ENCODE 22.4 +24.5 24484 3.6 CTCF PRDM1 MLLT1 RAD21 ZBTB33 REST TRIM22 SMC3 PRDM4 ZFP69B MORC2-AS1 MORC2 TUG1 SMTN TCN2 PES1 ENSG00000223831 OSBP2 PIR35344
GH22J030828 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -91.2 -91189 4.4 MAFK ELF1 REST BRCA1 CEBPB CHD2 JUN SP1 RCOR1 ELK1 MORC2-AS1 MORC2 SLC35E4 DUSP18 OSBP2 LOC105372994 MIR3200
GH22J030895 Enhancer 0.6 FANTOM5 Ensembl 22.8 -27.9 -27877 2.1 BCL11B BACH1 MORC2-AS1 MORC2 INPP5J PLA2G3 ENSG00000249590 SEC14L2 OSBP2 SEC14L4 EIF4HP2 GC22M030886
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MORC2-AS1 Gene

Genomic Locations for MORC2-AS1 Gene
chr22:30,922,308-30,932,449
(GRCh38/hg38)
Size:
10,142 bases
Orientation:
Plus strand
chr22:31,318,295-31,328,436
(GRCh37/hg19)
Size:
10,142 bases
Orientation:
Plus strand

Genomic View for MORC2-AS1 Gene

Genes around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MORC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MORC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MORC2-AS1 Gene

Function for MORC2-AS1 Gene

Phenotypes From GWAS Catalog for MORC2-AS1 Gene

genes like me logo Genes that share phenotypes with MORC2-AS1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MORC2-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MORC2-AS1 Gene

Localization for MORC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MORC2-AS1 Gene

Pathways & Interactions for MORC2-AS1 Gene

PathCards logo

SuperPathways for MORC2-AS1 Gene

No Data Available

Interacting Proteins for MORC2-AS1 Gene

Gene Ontology (GO) - Biological Process for MORC2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MORC2-AS1 Gene

Drugs & Compounds for MORC2-AS1 Gene

No Compound Related Data Available

Transcripts for MORC2-AS1 Gene

mRNA/cDNA for MORC2-AS1 Gene

Unigene Clusters for MORC2-AS1 Gene

MORC2 antisense RNA 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MORC2-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for MORC2-AS1 Gene

No ASD Table

Relevant External Links for MORC2-AS1 Gene

GeneLoc Exon Structure for
MORC2-AS1
ECgene alternative splicing isoforms for
MORC2-AS1

Expression for MORC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MORC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MORC2-AS1 Gene

This gene is overexpressed in Testis (x10.3).

SOURCE GeneReport for Unigene cluster for MORC2-AS1 Gene:

Hs.592202
genes like me logo Genes that share expression patterns with MORC2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MORC2-AS1 Gene

Orthologs for MORC2-AS1 Gene

Evolution for MORC2-AS1 Gene

ENSEMBL:
Gene Tree for MORC2-AS1 (if available)
TreeFam:
Gene Tree for MORC2-AS1 (if available)

No data available for Orthologs for MORC2-AS1 Gene

Paralogs for MORC2-AS1 Gene

No data available for Paralogs for MORC2-AS1 Gene

Variants for MORC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MORC2-AS1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs138812699 likely-benign, Charcot-Marie-Tooth disease, axonal, type 2z 30,926,839(+) G/A downstream_transcript_variant
rs149110760 likely-benign, Charcot-Marie-Tooth disease, axonal, type 2z 30,926,821(+) G/A/T downstream_transcript_variant
rs1000025457 -- 30,920,615(+) A/T upstream_transcript_variant
rs1000141320 -- 30,920,406(+) T/C upstream_transcript_variant
rs1000323114 -- 30,925,884(+) G/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MORC2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3647569 CNV gain 21293372
nsv1110864 OTHER inversion 24896259

Additional Variant Information for MORC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MORC2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MORC2-AS1 Gene

Disorders for MORC2-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MORC2-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
charcot-marie-tooth disease, axonal, type 2z
  • cmt2z
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MORC2-AS1

genes like me logo Genes that share disorders with MORC2-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MORC2-AS1 Gene

Publications for MORC2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MORC2-AS1 Gene

Sources for MORC2-AS1 Gene

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