Aliases for MORC2-AS1 Gene

Subcategory (RNA class) for MORC2-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for MORC2-AS1 Gene

  • MORC2 Antisense RNA 1 2 3 5
  • MORC2-AS1 2 5 165
  • MORC2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 22 Open Reading Frame 27 2
  • Non-Protein Coding RNA 325 2
  • NONHSAG033690.2 91
  • HSALNG0134927 164
  • NCRNA00325 3
  • C22orf27 3
  • FLJ35801 2

External Ids for MORC2-AS1 Gene

Previous HGNC Symbols for MORC2-AS1 Gene

  • C22orf27
  • NCRNA00325

Previous GeneCards Identifiers for MORC2-AS1 Gene

  • GC22P031319
  • GC22P031323
  • GC22P031325

Summaries for MORC2-AS1 Gene

GeneCards Summary for MORC2-AS1 Gene

MORC2-AS1 (MORC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MORC2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MORC2-AS1 Gene

Genomics for MORC2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MORC2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J030920 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE CraniofacialAtlas 613.8 -0.6 -607 2.6 CTCF REST POLR2A LARP7 ZNF143 PRDM1 RAD21 SP1 TRIM22 SCRT2 MORC2-AS1 LOC107985544 EIF4HP2 piR-43110-003 MORC2 OSBP2
GH22J030967 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.6 +46.9 46892 6 SP1 HNRNPL CREB1 ATF7 PRDM10 ZNF629 TFE3 IKZF1 KDM1A POLR2A TUG1 MORC2 ENSG00000276664 SF3A1 PES1 SMTN PATZ1 LOC91370 MORC2-AS1 PRR14L
GH22J030944 Enhancer 0.8 Ensembl ENCODE 22.4 +24.6 24583 3.8 CTCF PRDM1 REST RAD21 TRIM22 SMC3 PRDM4 ZFP69B ZNF654 SMARCA4 MORC2-AS1 MORC2 TUG1 SMTN PES1 TCN2 ENSG00000223831 OSBP2 piR-42345
GH22J030828 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -91.2 -91249 4.5 REST CEBPB SP1 BRCA1 ESR1 ATF3 NR3C1 CHD2 JUN RCOR1 lnc-MORC2-5 MORC2-AS1 MORC2 SLC35E4 DUSP18 OSBP2 lnc-MORC2-6 lnc-SLC35E4-2
GH22J030895 Enhancer 0.6 FANTOM5 Ensembl 23.2 -28.3 -28277 2.9 BCL11B BACH1 MAFK MORC2-AS1 MORC2 INPP5J PLA2G3 ENSG00000249590 SEC14L2 OSBP2 SEC14L4 EIF4HP2 piR-58932
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MORC2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MORC2-AS1 Gene

Genomic Locations for MORC2-AS1 Gene
chr22:30,922,308-30,932,449
(GRCh38/hg38)
Size:
10,142 bases
Orientation:
Plus strand
chr22:31,318,295-31,328,436
(GRCh37/hg19)
Size:
10,142 bases
Orientation:
Plus strand

Genomic View for MORC2-AS1 Gene

Genes around MORC2-AS1 on UCSC Golden Path with GeneCards custom track
MORC2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MORC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MORC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MORC2-AS1 Gene

Proteins for MORC2-AS1 Gene

Post-translational modifications for MORC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MORC2-AS1 Gene

Domains & Families for MORC2-AS1 Gene

Gene Families for MORC2-AS1 Gene

genes like me logo Genes that share domains with MORC2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MORC2-AS1 Gene

Function for MORC2-AS1 Gene

Phenotypes From GWAS Catalog for MORC2-AS1 Gene

Phenotypes for MORC2-AS1 Gene

genes like me logo Genes that share phenotypes with MORC2-AS1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MORC2-AS1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MORC2-AS1 Gene

Localization for MORC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MORC2-AS1 Gene

Pathways & Interactions for MORC2-AS1 Gene

PathCards logo

SuperPathways for MORC2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MORC2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MORC2-AS1 Gene

Drugs & Compounds for MORC2-AS1 Gene

No Compound Related Data Available

Transcripts for MORC2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MORC2-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075DB1B_9606 lncRNA 2134 3

HGNC: 26662,

RefSeq: NR_026920,

LNCipedia: MORC2-AS1:14,

URS00005A76C2_9606 lncRNA 596 3

Ensembl: ENST00000609557 (view in UCSC) ,

LNCipedia: MORC2-AS1:6,

NONCODE: NONHSAT192250.1,

URS0000386BE3_9606 lncRNA 2274 2

Ensembl: ENST00000422995 (view in UCSC) ,

LNCipedia: MORC2-AS1:5,

URS00003EE6FB_9606 lncRNA 2030 2

Ensembl: ENST00000432624 (view in UCSC) ,

LNCipedia: MORC2-AS1:1,

URS00005CDF6E_9606 lncRNA 425 2

Ensembl: ENST00000441558 (view in UCSC) ,

NONCODE: NONHSAT084820.2,

MORC2-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MORC2-AS1 Gene

1 REFSEQ mRNAs :
8 NCBI additional mRNA sequence :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for MORC2-AS1

Alternative Splicing Database (ASD) splice patterns (SP) for MORC2-AS1 Gene

No ASD Table

Relevant External Links for MORC2-AS1 Gene

GeneLoc Exon Structure for
MORC2-AS1

Expression for MORC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MORC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MORC2-AS1 Gene

This gene is overexpressed in Testis (x10.3).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MORC2-AS1

SOURCE GeneReport for Unigene cluster for MORC2-AS1 Gene:

Hs.592202
genes like me logo Genes that share expression patterns with MORC2-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MORC2-AS1 Gene

Orthologs for MORC2-AS1 Gene

Evolution for MORC2-AS1 Gene

ENSEMBL:
Gene Tree for MORC2-AS1 (if available)
TreeFam:
Gene Tree for MORC2-AS1 (if available)

No data available for Orthologs for MORC2-AS1 Gene

Paralogs for MORC2-AS1 Gene

No data available for Paralogs for MORC2-AS1 Gene

Variants for MORC2-AS1 Gene

Additional dbSNP identifiers (rs#s) for MORC2-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for MORC2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3647569 CNV gain 21293372
nsv1110864 OTHER inversion 24896259

Additional Variant Information for MORC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MORC2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MORC2-AS1 Gene

Disorders for MORC2-AS1 Gene

No disorders were found for MORC2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MORC2-AS1 Gene

Publications for MORC2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3

Products for MORC2-AS1 Gene

Sources for MORC2-AS1 Gene