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Aliases for MORC2-AS1 Gene

Subcategory (RNA class) for MORC2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MORC2-AS1 Gene

  • MORC2 Antisense RNA 1 2 3 5
  • MORC2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 22 Open Reading Frame 27 2
  • Non-Protein Coding RNA 325 2
  • NCRNA00325 3
  • C22orf27 3

External Ids for MORC2-AS1 Gene

Previous HGNC Symbols for MORC2-AS1 Gene

  • C22orf27
  • NCRNA00325

Previous GeneCards Identifiers for MORC2-AS1 Gene

  • GC22P031319
  • GC22P031323
  • GC22P031325

Summaries for MORC2-AS1 Gene

GeneCards Summary for MORC2-AS1 Gene

MORC2-AS1 (MORC2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MORC2-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MORC2-AS1 Gene

Genomics for MORC2-AS1 Gene

GeneHancer (GH) Regulatory Elements for MORC2-AS1 Gene

Promoters and enhancers for MORC2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I030921 Promoter/Enhancer 1.2 Ensembl ENCODE 563.9 -0.2 -173 1.5 RB1 MAX KLF5 E2F1 POLR2A SCRT2 ZNF143 RUNX3 CHD2 SMARCA5 MORC2-AS1 EIF4HP2 GC22M030911
GH22I030920 Enhancer 0.6 ENCODE 550.8 -1.8 -1809 0.2 CTCF ZNF654 TRIM22 REST RAD21 ARID2 GLIS1 SMC3 ZNF143 MLLT1 MORC2-AS1 GC22M030911
GH22I030828 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -91.2 -91189 4.4 MXI1 JUN MAX SIN3A RAD21 BRCA1 RFX5 E2F1 ELK1 POLR2A MORC2-AS1 MORC2 SLC35E4 DUSP18 OSBP2 LOC105372994 MIR3200
GH22I030944 Enhancer 0.6 ENCODE 22.4 +24.5 24480 3.6 CTCF ZNF654 ZBTB6 TRIM22 REST RAD21 ZFP69B GATA3 SMC3 ZBTB33 MORC2-AS1 MORC2 TUG1 SMTN PES1 TCN2 ENSG00000223831 OSBP2 PIR35344
GH22I031038 Enhancer 0.9 Ensembl ENCODE 10.8 +117.4 117414 3.2 BCOR NFIB ZMYM3 RAD21 ZNF121 FOS SMARCA5 ZNF280D GABPA NR2F2 MORC2-AS1 EIF4HP2 ENSG00000278920 ENSG00000269987
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MORC2-AS1 Gene

Genomic Locations for MORC2-AS1 Gene
chr22:30,922,308-30,932,449
(GRCh38/hg38)
Size:
10,142 bases
Orientation:
Plus strand
chr22:31,318,295-31,328,436
(GRCh37/hg19)

Genomic View for MORC2-AS1 Gene

Genes around MORC2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MORC2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MORC2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MORC2-AS1 Gene

Proteins for MORC2-AS1 Gene

Post-translational modifications for MORC2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MORC2-AS1 Gene

Domains & Families for MORC2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MORC2-AS1 Gene

Function for MORC2-AS1 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MORC2-AS1 Gene

Localization for MORC2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MORC2-AS1 Gene

Pathways & Interactions for MORC2-AS1 Gene

SuperPathways for MORC2-AS1 Gene

No Data Available

Interacting Proteins for MORC2-AS1 Gene

Gene Ontology (GO) - Biological Process for MORC2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MORC2-AS1 Gene

Drugs & Compounds for MORC2-AS1 Gene

No Compound Related Data Available

Transcripts for MORC2-AS1 Gene

Unigene Clusters for MORC2-AS1 Gene

MORC2 antisense RNA 1:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MORC2-AS1 Gene

No ASD Table

Relevant External Links for MORC2-AS1 Gene

GeneLoc Exon Structure for
MORC2-AS1
ECgene alternative splicing isoforms for
MORC2-AS1

Expression for MORC2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MORC2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for MORC2-AS1 Gene

This gene is overexpressed in Testis (x10.3).

SOURCE GeneReport for Unigene cluster for MORC2-AS1 Gene:

Hs.592202
genes like me logo Genes that share expression patterns with MORC2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MORC2-AS1 Gene

Orthologs for MORC2-AS1 Gene

Evolution for MORC2-AS1 Gene

ENSEMBL:
Gene Tree for MORC2-AS1 (if available)
TreeFam:
Gene Tree for MORC2-AS1 (if available)

No data available for Orthologs for MORC2-AS1 Gene

Paralogs for MORC2-AS1 Gene

No data available for Paralogs for MORC2-AS1 Gene

Variants for MORC2-AS1 Gene

Sequence variations from dbSNP and Humsavar for MORC2-AS1 Gene

SNP ID Clin Chr 22 pos Variation AA Info Type
rs138812699 likely-benign, Charcot-Marie-Tooth disease, axonal, type 2z 30,926,839(+) G/A downstream_transcript_variant
rs149110760 likely-benign, Charcot-Marie-Tooth disease, axonal, type 2z 30,926,821(+) G/A/T downstream_transcript_variant
rs1000025457 -- 30,920,615(+) A/T upstream_transcript_variant
rs1000141320 -- 30,920,406(+) T/C upstream_transcript_variant
rs1000323114 -- 30,925,884(+) G/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MORC2-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3647569 CNV gain 21293372
nsv1110864 OTHER inversion 24896259

Additional Variant Information for MORC2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MORC2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MORC2-AS1 Gene

Disorders for MORC2-AS1 Gene

Additional Disease Information for MORC2-AS1

No disorders were found for MORC2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MORC2-AS1 Gene

Publications for MORC2-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for MORC2-AS1 Gene

Sources for MORC2-AS1 Gene

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