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Aliases for MNX1-AS2 Gene

Subcategory (RNA class) for MNX1-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MNX1-AS2 Gene

  • MNX1 Antisense RNA 2 2 3 5

External Ids for MNX1-AS2 Gene

Previous GeneCards Identifiers for MNX1-AS2 Gene

  • GC07P156812
  • GC00U934612

Summaries for MNX1-AS2 Gene

GeneCards Summary for MNX1-AS2 Gene

MNX1-AS2 (MNX1 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MNX1-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MNX1-AS2 Gene

Genomics for MNX1-AS2 Gene

GeneHancer (GH) Regulatory Elements for MNX1-AS2 Gene

Promoters and enhancers for MNX1-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I157027 Enhancer 0.8 ENCODE dbSUPER 11.5 +22.0 22031 1.1 PKNOX1 HLF CEBPB CEBPG ZNF843 NFIL3 ZNF121 ZNF335 ATF4 CEBPA MNX1-AS2 NOM1 MNX1-AS1 ENSG00000236102
GH07I157158 Enhancer 0.6 Ensembl ENCODE 11.1 +152.8 152845 1.4 ZNF316 SP7 MNX1 MNX1-AS1 MNX1-AS2 GC07M157142 UBE3C GC07P157193 GC07P157194
GH07I156931 Enhancer 0.6 ENCODE 10.7 -73.8 -73757 1.8 SOX13 PKNOX1 JUN FOXA1 MITF SP1 ZNF366 SCRT2 PRDM1 TRIM28 MNX1-AS2 MNX1 MNX1-AS1 NOM1 LMBR1 LOC105375604 LOC102723795
GH07I156829 Enhancer 0.6 ENCODE 10 -176.0 -175999 0.2 SMARCE1 GATAD2B DPF2 CEBPG FOXA1 ZNF217 CTBP1 GATA3 FOS SETDB1 MNX1-AS2 MNX1 MNX1-AS1 GC07P156873 LMBR1 GC07M156670
GH07I156832 Enhancer 0.5 ENCODE 10 -173.2 -173159 0.2 CEBPB CEBPG ZNF24 SPI1 C7orf13 MNX1 MNX1-AS1 MNX1-AS2 GC07P156873 LMBR1 GC07M156670
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MNX1-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MNX1-AS2 Gene

Genomic Locations for MNX1-AS2 Gene
chr7:157,005,881-157,007,132
(GRCh38/hg38)
Size:
1,252 bases
Orientation:
Plus strand

Genomic View for MNX1-AS2 Gene

Genes around MNX1-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MNX1-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MNX1-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MNX1-AS2 Gene

Proteins for MNX1-AS2 Gene

Post-translational modifications for MNX1-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MNX1-AS2 Gene

Domains & Families for MNX1-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MNX1-AS2 Gene

Function for MNX1-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MNX1-AS2 Gene

Localization for MNX1-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MNX1-AS2 Gene

Pathways & Interactions for MNX1-AS2 Gene

SuperPathways for MNX1-AS2 Gene

No Data Available

Interacting Proteins for MNX1-AS2 Gene

Gene Ontology (GO) - Biological Process for MNX1-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MNX1-AS2 Gene

Drugs & Compounds for MNX1-AS2 Gene

No Compound Related Data Available

Transcripts for MNX1-AS2 Gene

mRNA/cDNA for MNX1-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for MNX1-AS2 Gene

No ASD Table

Relevant External Links for MNX1-AS2 Gene

GeneLoc Exon Structure for
MNX1-AS2
ECgene alternative splicing isoforms for
MNX1-AS2

Expression for MNX1-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MNX1-AS2 Gene

genes like me logo Genes that share expression patterns with MNX1-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MNX1-AS2 Gene

Orthologs for MNX1-AS2 Gene

Evolution for MNX1-AS2 Gene

ENSEMBL:
Gene Tree for MNX1-AS2 (if available)
TreeFam:
Gene Tree for MNX1-AS2 (if available)

No data available for Orthologs for MNX1-AS2 Gene

Paralogs for MNX1-AS2 Gene

No data available for Paralogs for MNX1-AS2 Gene

Variants for MNX1-AS2 Gene

Sequence variations from dbSNP and Humsavar for MNX1-AS2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs121912546 pathogenic, Currarino triad 157,006,556(+) G/A intron_variant
rs121912548 pathogenic, Currarino triad 157,006,595(+) T/A intron_variant
rs121912549 pathogenic, Currarino triad 157,006,487(+) C/A intron_variant
rs1064794653 likely-pathogenic, not provided 157,005,841(+) T/G upstream_transcript_variant
rs1064796665 likely-pathogenic, not provided 157,006,520(+) G/ intron_variant

Additional Variant Information for MNX1-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MNX1-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MNX1-AS2 Gene

Disorders for MNX1-AS2 Gene

Additional Disease Information for MNX1-AS2

No disorders were found for MNX1-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MNX1-AS2 Gene

Publications for MNX1-AS2 Gene

  1. Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls. (PMID: 27816668) Long W … Ding H (Clinica chimica acta; international journal of clinical chemistry 2016) 2 3 58

Products for MNX1-AS2 Gene

Sources for MNX1-AS2 Gene

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