Aliases for MN297208 Gene

Subcategory (RNA class) for MN297208 Gene

lncRNA

Number of RNA Genes sources:

1 / 17

Aliases for MN297208 Gene

No Aliases found

No data available for External Ids for MN297208 Gene

Summaries for MN297208 Gene

GeneCards Summary for MN297208 Gene

MN297208 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MN297208 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MN297208 Gene

Genomics for MN297208 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MN297208 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J048542 Enhancer 0.9 ENCODE CraniofacialAtlas dbSUPER 600.7 +0.3 283 1.5 REST FOXA1 SP1 NR2F2 CTCF POLR2A ZNF335 RAD21 HNF4A FEZF1 MN297208 RB1 LINC00462 lnc-RCBTB2-4 RCBTB2 ENSG00000287599 CYSLTR2
GH13J048561 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.2 -19163 2.3 SP1 POLR2A BACH1 STAT3 RELA TCF12 IKZF2 RCOR1 TRIM22 EED RCBTB2 LPAR6 RB1 FNDC3A ITM2B CYSLTR2 lnc-RCBTB2-1 MN297208
GH13J048567 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -26.9 -26868 5.9 SOX13 RCOR2 SP1 PKNOX1 CEBPA TCF7 FOXA2 YY1 ZKSCAN1 TEAD1 LOC105370201 lnc-RCBTB2-1 RB1 RCBTB2 LPAR6 RB1-DT FNDC3A LINC01077 MN297208 CYSLTR2
GH13J048556 Enhancer 0.8 FANTOM5 Ensembl dbSUPER 0.4 -13.9 -13908 2.4 ZNF507 ZNF680 MED4 FNDC3A RB1 RCBTB2 LINC00462 MED4-AS1 LPAR6 MN297208 lnc-RCBTB2-1 ENSG00000287599
GH13J048564 Enhancer 0.6 ENCODE dbSUPER 0.4 -21.1 -21147 0.2 JUND ZBTB17 FOSL1 NR2F2 ATF3 MLLT1 lnc-RCBTB2-1 MN297208 RCBTB2 CYSLTR2 RB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MN297208 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MN297208 Gene

Genomic Locations for MN297208 Gene
chr13:48,541,880-48,543,093
(GRCh38/hg38)
Size:
1,214 bases
Orientation:
Minus strand

Genomic View for MN297208 Gene

Genes around MN297208 on UCSC Golden Path with GeneCards custom track
MN297208 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

MN297208 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MN297208 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for MN297208 Gene

Proteins for MN297208 Gene

Post-translational modifications for MN297208 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MN297208 Gene

Domains & Families for MN297208 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MN297208 Gene

Function for MN297208 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MN297208 Gene

Localization for MN297208 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MN297208 Gene

Pathways & Interactions for MN297208 Gene

PathCards logo

SuperPathways for MN297208 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MN297208 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MN297208 Gene

Drugs & Compounds for MN297208 Gene

No Compound Related Data Available

Transcripts for MN297208 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MN297208 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00019A8AA1_9606 lncRNA 1214 1

ENA: MN297208.1:1..1214:ncRNA,

MN297208 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MN297208 Gene

No ASD Table

Relevant External Links for MN297208 Gene

GeneLoc Exon Structure for
MN297208

No data available for mRNA/cDNA for MN297208 Gene

Expression for MN297208 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MN297208 Gene

Orthologs for MN297208 Gene

No data available for Orthologs and Evolution for MN297208 Gene

Paralogs for MN297208 Gene

No data available for Paralogs for MN297208 Gene

Variants for MN297208 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for MN297208 Gene

Disorders for MN297208 Gene

No disorders were found for MN297208 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MN297208 Gene

Publications for MN297208 Gene

No publications were found for MN297208 Gene.

No data available for Mastermind for MN297208 Gene

Products for MN297208 Gene

Sources for MN297208 Gene