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MKRN7P Gene(Pseudogene)

Makorin Ring Finger Protein 7, Pseudogene

GCID:
GC20M046463
GIFtS:
15
Genes Participants
UDN Logo

Aliases for MKRN7P Gene

Aliases for MKRN7P Gene

  • Makorin Ring Finger Protein 7, Pseudogene 2 3 5
  • Makorin Ring Finger Protein Pseudogene 3 2 3
  • Zinc Finger Protein 127-Like 5 3
  • DJ981L23.2 3
  • ZNF127L5 3
  • MKRNP3 3

External Ids for MKRN7P Gene

Previous HGNC Symbols for MKRN7P Gene

  • ZNF127L5
  • MKRNP3

Previous GeneCards Identifiers for MKRN7P Gene

  • GC20M045093

Summaries for MKRN7P Gene

GeneCards Summary for MKRN7P Gene

MKRN7P (Makorin Ring Finger Protein 7, Pseudogene) is a Pseudogene.

Additional gene information for MKRN7P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MKRN7P Gene

Genomics for MKRN7P Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for MKRN7P Gene

Promoters and enhancers for MKRN7P Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH20I046405 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 15.7 +70.6 70637 2.7 PKNOX1 ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B YY1 ZNF143 FOS KLF13 ELMO2 LOC105372633 NCOA5 TP53RK MKRN7P SPATA25 LOC100131496 GC20M046352
GH20I045967 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 9.7 +506.4 506358 5.8 CLOCK ZFP64 FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF416 ZNF143 ZNF335 NCOA5 SLC35C2 TP53RK ZNF334 PCIF1 ZNF663P CD40 ENSG00000271984 SPATA25
GH20I046458 Enhancer 0.8 Ensembl ENCODE 16.7 +18.1 18061 1.5 ZFP64 NRF1 MAX CBFA2T3 SP1 POLR2A ZNF184 CTBP2 ZNF143 GC20M046427 ZNF663P MKRN7P ELMO2 ENSG00000283757
GH20I046387 Enhancer 0.3 dbSUPER 5.7 +88.4 88435 1.9 ZNF282 ELMO2 MKRN7P LOC105372633 GC20M046352 ENSG00000273828
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MKRN7P on UCSC Golden Path with GeneCards custom track

Genomic Locations for MKRN7P Gene

Genomic Locations for MKRN7P Gene
chr20:46,463,660-46,477,232
(GRCh38/hg38)
Size:
13,573 bases
Orientation:
Minus strand
chr20:45,092,299-45,093,931
(GRCh37/hg19)

Genomic View for MKRN7P Gene

Genes around MKRN7P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MKRN7P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MKRN7P Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MKRN7P Gene

Proteins for MKRN7P Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MKRN7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for MKRN7P Gene

Domains & Families for MKRN7P Gene

Gene Families for MKRN7P Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MKRN7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKRN7P Gene

Function for MKRN7P Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MKRN7P Gene

Localization for MKRN7P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MKRN7P Gene

Pathways & Interactions for MKRN7P Gene

SuperPathways for MKRN7P Gene

PathCards logo More details on SuperPathways for MKRN7P
No Data Available

Interacting Proteins for MKRN7P Gene

Gene Ontology (GO) - Biological Process for MKRN7P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MKRN7P Gene

Drugs & Compounds for MKRN7P Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MKRN7P Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for MKRN7P Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for MKRN7P Gene

Makorin ring finger protein 7, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MKRN7P Gene

No ASD Table

Relevant External Links for MKRN7P Gene

GeneLoc Exon Structure for
MKRN7P
ECgene alternative splicing isoforms for
MKRN7P

Expression for MKRN7P Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MKRN7P Gene

mRNA expression in normal human tissues for MKRN7P Gene
mRNA expression by GTEx for MKRN7P GenemRNA expression by BioGPS for MKRN7P Gene

mRNA differential expression in normal tissues according to GTEx for MKRN7P Gene

This gene is overexpressed in Brain - Cerebellum (x4.9) and Brain - Cerebellar Hemisphere (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of MKRN7P Gene:

MKRN7P

SOURCE GeneReport for Unigene cluster for MKRN7P Gene:

Hs.717103
genes like me logo Genes that share expression patterns with MKRN7P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MKRN7P Gene

Orthologs for MKRN7P Gene

Evolution for MKRN7P Gene

ENSEMBL:
Gene Tree for MKRN7P (if available)
TreeFam:
Gene Tree for MKRN7P (if available)

No data available for Orthologs for MKRN7P Gene

Paralogs for MKRN7P Gene

No data available for Paralogs for MKRN7P Gene

Variants for MKRN7P Gene

Sequence variations from dbSNP and Humsavar for MKRN7P Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000214014 -- 46,465,102(-) A/C/G non_coding_transcript_variant
rs1000329843 -- 46,464,937(-) T/C non_coding_transcript_variant
rs1000383 -- 46,464,282(-) G/A non_coding_transcript_variant
rs1000701417 -- 46,465,124(-) T/C non_coding_transcript_variant
rs1001751757 -- 46,465,587(-) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MKRN7P Gene

Variant ID Type Subtype PubMed ID
nsv1058633 CNV loss 25217958
nsv833994 CNV gain 17160897

Additional Variant Information for MKRN7P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MKRN7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MKRN7P Gene

Disorders for MKRN7P Gene

Additional Disease Information for MKRN7P

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MKRN7P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MKRN7P Gene

Publications for MKRN7P Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for MKRN7P Gene

Sources for MKRN7P Gene

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