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Aliases for MKRN3-AS1 Gene

Subcategory (RNA class) for MKRN3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for MKRN3-AS1 Gene

  • MKRN3 Antisense RNA 1 2 3
  • MKRN3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 9 2 3
  • Makorin, Ring Finger Protein, 3 Antisense 3
  • MKRN3 Antisense RNA (Non-Protein Coding) 2
  • Zinc Finger Protein 127, Antisense 2
  • Zinc Finger Protein 127 Antisense 3
  • NCRNA00009 3
  • ZNF127-AS 3
  • MKRN3-AS 3
  • ZNF127AS 3
  • MKRN3AS 3
  • FNZ127 3

External Ids for MKRN3-AS1 Gene

Previous HGNC Symbols for MKRN3-AS1 Gene

  • ZNF127AS
  • MKRN3AS
  • MKRN3-AS

Previous GeneCards Identifiers for MKRN3-AS1 Gene

  • GC15U901326

Summaries for MKRN3-AS1 Gene

GeneCards Summary for MKRN3-AS1 Gene

MKRN3-AS1 (MKRN3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for MKRN3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MKRN3-AS1 Gene

Genomics for MKRN3-AS1 Gene

GeneHancer (GH) Regulatory Elements for MKRN3-AS1 Gene

Promoters and enhancers for MKRN3-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I023570 Enhancer 0.3 ENCODE 550.8 -1.0 -1012 0.2 SOX13 GC15M023573 MKRN3-AS1 MKRN3 PIR53131
GH15I022895 Enhancer 0.8 ENCODE 5 +673.6 673591 1.7 PKNOX1 CLOCK SIN3A BATF TCF12 FOS SMARCC1 USF2 JUNB CEBPB CYFIP1 NIPA2 MKRN3-AS1 PIR44215 PIR53215
GH15I023642 Enhancer 0.8 Ensembl ENCODE 0.2 -73.0 -73011 0.3 CTCF MAZ ZNF654 RB1 REST RAD21 SMC3 ZNF143 RUNX3 PIR53131 MKRN3-AS1
GH15I023596 Enhancer 0.3 FANTOM5 0.3 -27.3 -27282 0.3 MKRN3 MKRN3-AS1 PIR53131
GH15I023633 Enhancer 0.2 ENCODE 0.2 -64.7 -64655 0.9 PIR53131 MKRN3-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MKRN3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MKRN3-AS1 Gene

Genomic Locations for MKRN3-AS1 Gene
chr15:23,567,264-23,569,657
(GRCh38/hg38)
Size:
2,394 bases
Orientation:
Minus strand

Genomic View for MKRN3-AS1 Gene

Genes around MKRN3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MKRN3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MKRN3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for MKRN3-AS1 Gene

Proteins for MKRN3-AS1 Gene

Post-translational modifications for MKRN3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MKRN3-AS1 Gene

Domains & Families for MKRN3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MKRN3-AS1 Gene

Function for MKRN3-AS1 Gene

Human Phenotype Ontology for MKRN3-AS1 Gene

HPO Id HPO Name Alternative Ids Definition Synonyms

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MKRN3-AS1 Gene

Localization for MKRN3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MKRN3-AS1 Gene

Pathways & Interactions for MKRN3-AS1 Gene

SuperPathways for MKRN3-AS1 Gene

No Data Available

Interacting Proteins for MKRN3-AS1 Gene

Gene Ontology (GO) - Biological Process for MKRN3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MKRN3-AS1 Gene

Drugs & Compounds for MKRN3-AS1 Gene

No Compound Related Data Available

Transcripts for MKRN3-AS1 Gene

mRNA/cDNA for MKRN3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MKRN3-AS1 Gene

No ASD Table

Relevant External Links for MKRN3-AS1 Gene

GeneLoc Exon Structure for
MKRN3-AS1
ECgene alternative splicing isoforms for
MKRN3-AS1

Expression for MKRN3-AS1 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MKRN3-AS1 Gene

Orthologs for MKRN3-AS1 Gene

Evolution for MKRN3-AS1 Gene

ENSEMBL:
Gene Tree for MKRN3-AS1 (if available)
TreeFam:
Gene Tree for MKRN3-AS1 (if available)

No data available for Orthologs for MKRN3-AS1 Gene

Paralogs for MKRN3-AS1 Gene

No data available for Paralogs for MKRN3-AS1 Gene

Variants for MKRN3-AS1 Gene

Additional Variant Information for MKRN3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MKRN3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MKRN3-AS1 Gene

Disorders for MKRN3-AS1 Gene

No disorders were found for MKRN3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for MKRN3-AS1 Gene

Publications for MKRN3-AS1 Gene

  1. A novel imprinted gene, encoding a RING zinc-finger protein, and overlapping antisense transcript in the Prader-Willi syndrome critical region. (PMID: 10196367) Jong MT … Nicholls RD (Human molecular genetics 1999) 2 3 22 58
  2. Genomic imprinting: potential function and mechanisms revealed by the Prader-Willi and Angelman syndromes. (PMID: 9237260) Glenn CC … Nicholls RD (Molecular human reproduction 1997) 2 3 58
  3. Genomic imprinting disorders in humans: a mini-review. (PMID: 19844787) Butler MG (Journal of assisted reproduction and genetics 2009) 3 58
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for MKRN3-AS1 Gene

Sources for MKRN3-AS1 Gene

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