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Aliases for MIR933 Gene

Subcategory (RNA class) for MIR933 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR933 Gene

  • MicroRNA 933 2 3 5
  • Hsa-Mir-933 3
  • Mir-933 3
  • MIRN933 3

External Ids for MIR933 Gene

Previous HGNC Symbols for MIR933 Gene

  • MIRN933

Previous GeneCards Identifiers for MIR933 Gene

  • GC02M175742
  • GC02M176032

Summaries for MIR933 Gene

Entrez Gene Summary for MIR933 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR933 Gene

MIR933 (MicroRNA 933) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR933 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR933 Gene

Genomics for MIR933 Gene

GeneHancer (GH) Regulatory Elements for MIR933 Gene

Promoters and enhancers for MIR933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I175165 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.4 379 4.2 CLOCK ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D ATF2 ENSG00000229750 MIR933 ATP5MC3 GC02P175143
GH02I175061 Enhancer 0.9 ENCODE 10.3 +104.8 104767 2.1 FOXA2 MLX ZFP64 ARID4B DMAP1 ZNF48 ETS1 TCF12 ZNF280A SLC30A9 ATP5MC3 CHRNA1 CHN1 ENSG00000229750 MIR933 ATF2 GC02M175073 RPL21P31
GH02I175036 Enhancer 0.8 Ensembl 9.9 +130.9 130908 0.4 ATF1 FOXA2 DMAP1 RAD21 RARA THAP11 MIXL1 ZNF654 PPARG NR2F2 CHN1 ATF2 ENSG00000229750 MIR933 WIPF1 RPL21P31 GC02M175073
GH02I175096 Enhancer 0.4 ENCODE 10.6 +70.2 70188 1.3 RFX1 FOS ATP5MC3 ENSG00000229750 MIR933 ATF2 ENSG00000277948 GC02P175143
GH02I175057 Enhancer 0.4 ENCODE 10 +110.4 110421 0.2 SSRP1 TCF7 CHN1 RNU6-763P MIR933 ATF2 ENSG00000229750 GC02M175073 RPL21P31
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR933 Gene

Genomic Locations for MIR933 Gene
chr2:175,167,633-175,167,709
(GRCh38/hg38)
Size:
77 bases
Orientation:
Minus strand
chr2:176,032,361-176,032,437
(GRCh37/hg19)

Genomic View for MIR933 Gene

Genes around MIR933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR933 Gene

Proteins for MIR933 Gene

Post-translational modifications for MIR933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR933 Gene

Domains & Families for MIR933 Gene

Gene Families for MIR933 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR933: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR933 Gene

Function for MIR933 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR933 Gene

Localization for MIR933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR933 Gene

Pathways & Interactions for MIR933 Gene

SuperPathways for MIR933 Gene

No Data Available

Interacting Proteins for MIR933 Gene

Gene Ontology (GO) - Biological Process for MIR933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR933 Gene

Drugs & Compounds for MIR933 Gene

No Compound Related Data Available

Transcripts for MIR933 Gene

mRNA/cDNA for MIR933 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR933 Gene

No ASD Table

Relevant External Links for MIR933 Gene

GeneLoc Exon Structure for
MIR933
ECgene alternative splicing isoforms for
MIR933

Expression for MIR933 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR933 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR933 Gene:

MIR933
genes like me logo Genes that share expression patterns with MIR933: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR933 Gene

Orthologs for MIR933 Gene

Evolution for MIR933 Gene

ENSEMBL:
Gene Tree for MIR933 (if available)
TreeFam:
Gene Tree for MIR933 (if available)

No data available for Orthologs for MIR933 Gene

Paralogs for MIR933 Gene

No data available for Paralogs for MIR933 Gene

Variants for MIR933 Gene

Sequence variations from dbSNP and Humsavar for MIR933 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1003214060 -- 175,168,733(-) C/G upstream_transcript_variant
rs1003656871 -- 175,168,330(-) C/A upstream_transcript_variant
rs1003908734 -- 175,168,887(-) A/G upstream_transcript_variant
rs1004030920 -- 175,168,554(-) G/A upstream_transcript_variant
rs1005494783 -- 175,167,913(-) G/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR933 Gene

Variant ID Type Subtype PubMed ID
nsv3044 CNV deletion 18451855
nsv1012709 CNV gain 25217958

Additional Variant Information for MIR933 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR933

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR933 Gene

Disorders for MIR933 Gene

Additional Disease Information for MIR933

No disorders were found for MIR933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR933 Gene

Publications for MIR933 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  2. Patterns of known and novel small RNAs in human cervical cancer. (PMID: 17616659) Lui WO … Fire A (Cancer research 2007) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR933 Gene

Sources for MIR933 Gene

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