microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR8087 Gene

Subcategory (RNA class) for MIR8087 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR8087 Gene

  • MicroRNA 8087 2 3 5
  • Hsa-Mir-8087 2 3
  • MIR8087 2 5
  • MicroRNA Mir-8087 3
  • MIMAT0031014 50
  • MI0025923 50

External Ids for MIR8087 Gene

Previous GeneCards Identifiers for MIR8087 Gene

  • GC11U902212

Summaries for MIR8087 Gene

Entrez Gene Summary for MIR8087 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR8087 Gene

MIR8087 (MicroRNA 8087) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR8087 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR8087 Gene

Genomics for MIR8087 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR8087 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J027514 Enhancer 0.8 Ensembl ENCODE 600.7 +0.4 393 1 PRDM1 FOXA2 YY1 ZBTB33 JUND ZNF335 USF2 HNF4A RXRA MAX MIR8087 BDNF-AS LIN7C lnc-BBOX1-5 lnc-BBOX1-10 BDNF
GH11J027512 Enhancer 0.4 Ensembl 0.7 +2.0 2046 2 SCRT2 ZBTB33 EGR2 LIN7C BDNF-AS MIR8087 lnc-BBOX1-5 lnc-BBOX1-10 BDNF
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR8087 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR8087 Gene

Genomic Locations for MIR8087 Gene
chr11:27,514,970-27,515,047
(GRCh38/hg38)
Size:
78 bases
Orientation:
Minus strand

Genomic View for MIR8087 Gene

Genes around MIR8087 on UCSC Golden Path with GeneCards custom track
MIR8087 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR8087 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR8087 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR8087 Gene

Proteins for MIR8087 Gene

Post-translational modifications for MIR8087 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR8087 Gene

Domains & Families for MIR8087 Gene

Gene Families for MIR8087 Gene

HGNC:
genes like me logo Genes that share domains with MIR8087: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR8087 Gene

Function for MIR8087 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR8087 Gene

Localization for MIR8087 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR8087 Gene

Pathways & Interactions for MIR8087 Gene

PathCards logo

SuperPathways for MIR8087 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR8087 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR8087 Gene

Drugs & Compounds for MIR8087 Gene

No Compound Related Data Available

Transcripts for MIR8087 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR8087 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075DDE8_9606 precursor_RNA 78 4

HGNC: 50059,

RefSeq: NR_107054,

Ensembl: ENST00000612745 (view in UCSC) ,

miRBase: MI0025923,

URS000075A8CE_9606 miRNA 23 2

RefSeq: NR_107054,

miRBase: MIMAT0031014,

MIR8087 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR8087 Gene

No ASD Table

Relevant External Links for MIR8087 Gene

GeneLoc Exon Structure for
MIR8087

No data available for mRNA/cDNA for MIR8087 Gene

Expression for MIR8087 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR8087 Gene

Orthologs for MIR8087 Gene

Evolution for MIR8087 Gene

ENSEMBL:
Gene Tree for MIR8087 (if available)
TreeFam:
Gene Tree for MIR8087 (if available)

No data available for Orthologs for MIR8087 Gene

Paralogs for MIR8087 Gene

No data available for Paralogs for MIR8087 Gene

Variants for MIR8087 Gene

Additional dbSNP identifiers (rs#s) for MIR8087 Gene

Additional Variant Information for MIR8087 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR8087

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR8087 Gene

Disorders for MIR8087 Gene

Additional Disease Information for MIR8087

No disorders were found for MIR8087 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR8087 Gene

Publications for MIR8087 Gene

  1. Characterization and Identification of novel serum microRNAs in sepsis patients with different outcomes. (PMID: 23612084) Wang HJ … Xie LX (Shock (Augusta, Ga.) 2013) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR8087 Gene

Sources for MIR8087 Gene