microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR8082 Gene

Data sources for MIR8082 Gene:

RNA type for MIR8082 Gene

miRNA

Aliases for MIR8082 Gene

External Ids for MIR8082 Gene

Previous GeneCards Identifiers for MIR8082 Gene

  • GC04U901811

Summaries for MIR8082 Gene

Entrez Gene Summary for MIR8082 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR8082 Gene

MIR8082 (MicroRNA 8082) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR8082 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR8082 Gene

Genomics for MIR8082 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR8082 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J113153 Enhancer 0.7 Ensembl 250.7 +1.4 1408 0.6 CEBPA HOMEZ CTCF FOXA2 MAFF JUND MAFK PRDM6 RAD21 CEBPG MIR8082 piR-36475-007 ANK2 CAMK2D
GH04J113152 Enhancer 0.2 Ensembl 250.7 +0.2 235 1 MIR8082 piR-36475-007 ANK2 CAMK2D
GH04J113145 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 0.7 -4.9 -4922 4.6 SSRP1 CEBPA ATF3 POLR2A CHD4 YY1 MXD4 HOMEZ ZNF217 KMT2B ANK2 MIR8082 HSALNG0036494 CAMK2D
GH04J113171 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 +18.8 18819 2.2 CEBPA FOXA1 ZFP64 FOXA2 SMAD4 SAP130 RARA CREM FOXP1 BCL6 MIR8082 piR-36475-007 ANK2 CAMK2D
GH04J113141 Enhancer 0.9 ENCODE 0.4 -10.3 -10343 1.5 SSRP1 CEBPA CHD4 YY1 FOXA1 HOMEZ ZNF217 THAP11 FOXA2 CTBP1 HSALNG0036494 MIR8082 ANK2 CAMK2D
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR8082 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR8082 Gene

Latest Assembly
chr4:113,152,282-113,152,362
(GRCh38/hg38)
Size:
81 bases
Orientation:
Plus strand

Previous Assembly
chr4:114,073,438-114,073,518
(GRCh37/hg19 by Entrez Gene)
Size:
81 bases
Orientation:
Plus strand

Genomic View for MIR8082 Gene

Genes around MIR8082 on UCSC Golden Path with GeneCards custom track
MIR8082 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR8082 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR8082 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR8082 Gene

Proteins for MIR8082 Gene

Post-translational modifications for MIR8082 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR8082 Gene

Domains & Families for MIR8082 Gene

Gene Families for MIR8082 Gene

HGNC:
genes like me logo Genes that share domains with MIR8082: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR8082 Gene

Function for MIR8082 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR8082 Gene

Localization for MIR8082 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR8082 Gene

Pathways & Interactions for MIR8082 Gene

PathCards logo

SuperPathways for MIR8082 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR8082 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR8082 Gene

Drugs & Compounds for MIR8082 Gene

No Compound Related Data Available

Transcripts for MIR8082 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR8082 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075DCEA_9606 pre_miRNA 81 3

RefSeq: NR_107049,

Ensembl: ENST00000612488 (view in UCSC) ,

miRBase: MI0025918,

URS000075EC91_9606 miRNA 22 2

RefSeq: NR_107049,

miRBase: MIMAT0031009,

MIR8082 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR8082 Gene

No ASD Table

Relevant External Links for MIR8082 Gene

GeneLoc Exon Structure for
MIR8082

No data available for mRNA/cDNA for MIR8082 Gene

Expression for MIR8082 Gene

No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR8082 Gene

Orthologs for MIR8082 Gene

Evolution for MIR8082 Gene

ENSEMBL:
Gene Tree for MIR8082 (if available)
TreeFam:
Gene Tree for MIR8082 (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR8082

No data available for Orthologs for MIR8082 Gene

Paralogs for MIR8082 Gene

No data available for Paralogs for MIR8082 Gene

Variants for MIR8082 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR8082 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for MIR8082 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR8082
Leiden Open Variation Database (LOVD)
MIR8082

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR8082 Gene

Disorders for MIR8082 Gene

Additional Disease Information for MIR8082

No disorders were found for MIR8082 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR8082 Gene

Publications for MIR8082 Gene

  1. Characterization and Identification of novel serum microRNAs in sepsis patients with different outcomes. (PMID: 23612084) Wang HJ … Xie LX (Shock (Augusta, Ga.) 2013) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR8082 Gene

Sources for MIR8082 Gene