microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR8079 Gene

Subcategory (RNA class) for MIR8079 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for MIR8079 Gene

  • MicroRNA 8079 2 3 5
  • MicroRNA Mir-8079 3
  • Hsa-Mir-8079 3
  • MIMAT0031006 51
  • MI0025915 51
  • MIR8079 2

External Ids for MIR8079 Gene

Previous GeneCards Identifiers for MIR8079 Gene

  • GC13U901081

Summaries for MIR8079 Gene

Entrez Gene Summary for MIR8079 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR8079 Gene

MIR8079 (MicroRNA 8079) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR8079 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR8079 Gene

Genomics for MIR8079 Gene

GeneHancer (GH) Regulatory Elements for MIR8079 Gene

Promoters and enhancers for MIR8079 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J044196 Enhancer 0.5 Ensembl ENCODE dbSUPER 500.7 -0.1 -98 1.4 ENSG00000276854 MIR8079 lnc-SERP2-10 SMIM2-AS1
GH13J044197 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -2.5 -2520 3 ZIC2 RFX1 RELA EP300 FOS CEBPB BATF GATA3 IRF4 EBF1 lnc-SERP2-10 TSC22D1 ENSG00000276854 MIR8079 SMIM2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR8079 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR8079 Gene

Genomic Locations for MIR8079 Gene
chr13:44,196,129-44,196,200
(GRCh38/hg38)
Size:
72 bases
Orientation:
Minus strand

Genomic View for MIR8079 Gene

Genes around MIR8079 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR8079 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR8079 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR8079 Gene

Proteins for MIR8079 Gene

Post-translational modifications for MIR8079 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR8079 Gene

Domains & Families for MIR8079 Gene

Gene Families for MIR8079 Gene

HGNC:
genes like me logo Genes that share domains with MIR8079: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR8079 Gene

Function for MIR8079 Gene

Phenotypes From GWAS Catalog for MIR8079 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR8079 Gene

Localization for MIR8079 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR8079 Gene

Pathways & Interactions for MIR8079 Gene

PathCards logo

SuperPathways for MIR8079 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR8079 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR8079 Gene

Drugs & Compounds for MIR8079 Gene

No Compound Related Data Available

Transcripts for MIR8079 Gene

mRNA/cDNA for MIR8079 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 miRBase transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR8079 Gene

No ASD Table

Relevant External Links for MIR8079 Gene

GeneLoc Exon Structure for
MIR8079

Expression for MIR8079 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR8079 Gene

Orthologs for MIR8079 Gene

Evolution for MIR8079 Gene

ENSEMBL:
Gene Tree for MIR8079 (if available)
TreeFam:
Gene Tree for MIR8079 (if available)

No data available for Orthologs for MIR8079 Gene

Paralogs for MIR8079 Gene

No data available for Paralogs for MIR8079 Gene

Variants for MIR8079 Gene

Additional dbSNP identifiers (rs#s) for MIR8079 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR8079 Gene

Variant ID Type Subtype PubMed ID
nsv561574 CNV loss 21841781

Additional Variant Information for MIR8079 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR8079

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR8079 Gene

Disorders for MIR8079 Gene

Additional Disease Information for MIR8079

No disorders were found for MIR8079 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR8079 Gene

Publications for MIR8079 Gene

  1. Characterization and Identification of novel serum microRNAs in sepsis patients with different outcomes. (PMID: 23612084) Wang HJ … Xie LX (Shock (Augusta, Ga.) 2013) 3 54
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 54

Products for MIR8079 Gene

Sources for MIR8079 Gene