microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR7852 Gene

Subcategory (RNA class) for MIR7852 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR7852 Gene

  • MicroRNA 7852 2 3 5
  • MicroRNA Mir-7852 3
  • Hsa-Mir-7852 3
  • MIMAT0030427 53
  • MI0025522 53
  • MIR7852 2

External Ids for MIR7852 Gene

Previous GeneCards Identifiers for MIR7852 Gene

  • GC01U904164

Summaries for MIR7852 Gene

Entrez Gene Summary for MIR7852 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR7852 Gene

MIR7852 (MicroRNA 7852) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR7852 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR7852 Gene

Genomics for MIR7852 Gene

GeneHancer (GH) Regulatory Elements for MIR7852 Gene

Promoters and enhancers for MIR7852 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J107894 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 750.6 +0.4 353 6.5 ETV6 CREM MCM2 CEBPG IKZF1 TCF7L2 PRDM10 IKZF2 POLR2A ZXDB MIR7852 VAV3 VAV3-AS1 HG984097
GH01J107934 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.3 +38.9 38945 3.7 ZNF24 SP1 GATA3 SREBF1 TCF7L2 ZNF217 JUND ETV6 RELA MAX VAV3 VAV3-AS1 HG984097 MIR7852
GH01J107912 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +16.7 16678 4.6 SP7 CEBPB RFX5 GATA3 VAV3 VAV3-AS1 MIR7852 HG984097
GH01J107873 Enhancer 0.8 dbSUPER 0.3 -21.5 -21466 5 BCL6B SP7 ZSCAN21 PRDM1 CEBPG KLF14 PRDM10 ZNF639 IKZF2 ZEB2 PRPF38B VAV3 VAV3-AS1 lnc-NTNG1-3 MIR7852
GH01J107890 Enhancer 0.6 Ensembl dbSUPER 0.4 -6.4 -6422 1.2 NFE2 MAFK MAFF VAV3 VAV3-AS1 MIR7852 lnc-NTNG1-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR7852 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR7852 Gene

Genomic Locations for MIR7852 Gene
chr1:107,897,223-107,897,304
(GRCh38/hg38)
Size:
82 bases
Orientation:
Plus strand

Genomic View for MIR7852 Gene

Genes around MIR7852 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR7852 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR7852 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR7852 Gene

Proteins for MIR7852 Gene

Post-translational modifications for MIR7852 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR7852 Gene

Domains & Families for MIR7852 Gene

Gene Families for MIR7852 Gene

HGNC:
genes like me logo Genes that share domains with MIR7852: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR7852 Gene

Function for MIR7852 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR7852 Gene

Localization for MIR7852 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR7852 Gene

Pathways & Interactions for MIR7852 Gene

PathCards logo

SuperPathways for MIR7852 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR7852 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR7852 Gene

Drugs & Compounds for MIR7852 Gene

No Compound Related Data Available

Transcripts for MIR7852 Gene

mRNA/cDNA for MIR7852 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) miRBase transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR7852 Gene

No ASD Table

Relevant External Links for MIR7852 Gene

GeneLoc Exon Structure for
MIR7852
ECgene alternative splicing isoforms for
MIR7852

Expression for MIR7852 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR7852 Gene:

MIR7852
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR7852 Gene

Orthologs for MIR7852 Gene

Evolution for MIR7852 Gene

ENSEMBL:
Gene Tree for MIR7852 (if available)
TreeFam:
Gene Tree for MIR7852 (if available)

No data available for Orthologs for MIR7852 Gene

Paralogs for MIR7852 Gene

No data available for Paralogs for MIR7852 Gene

Variants for MIR7852 Gene

Sequence variations from dbSNP and Humsavar for MIR7852 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs1000523705 -- 107,896,674(+) T/C upstream_transcript_variant
rs1002378360 -- 107,896,382(+) A/G upstream_transcript_variant
rs1002839582 -- 107,896,115(+) T/C upstream_transcript_variant
rs1002986195 -- 107,896,343(+) T/A upstream_transcript_variant
rs1003057845 -- 107,896,598(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR7852 Gene

Variant ID Type Subtype PubMed ID
dgv248n100 CNV gain 25217958
dgv469n54 CNV gain 21841781
nsv1011093 CNV gain 25217958
nsv524680 CNV gain 19592680
nsv831015 CNV gain 17160897
nsv950534 CNV duplication 24416366

Additional Variant Information for MIR7852 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR7852

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR7852 Gene

Disorders for MIR7852 Gene

Additional Disease Information for MIR7852

No disorders were found for MIR7852 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR7852 Gene

Publications for MIR7852 Gene

  1. The repertoire and features of human platelet microRNAs. (PMID: 23226537) Plé H … Provost P (PloS one 2012) 3 56
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 56

No data available for External Links for MIR7852 Gene

Products for MIR7852 Gene

Sources for MIR7852 Gene