microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR7162 Gene

Data sources for MIR7162 Gene:

RNA type for MIR7162 Gene

miRNA

Aliases for MIR7162 Gene

External Ids for MIR7162 Gene

Previous GeneCards Identifiers for MIR7162 Gene

  • GC15M063215
  • GC10M030309

Summaries for MIR7162 Gene

Entrez Gene Summary for MIR7162 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR7162 Gene

MIR7162 (MicroRNA 7162) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR7162 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR7162 Gene

Genomics for MIR7162 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR7162 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J030366 Enhancer 0.5 Ensembl 250.7 +0.8 765 2.6 NFATC3 GABPB1 ZNF664 ATF3 SMARCA5 HSALNG0077020 RN7SL241P MIR7162 lnc-LYZL2-4 piR-44258-001 piR-46370-001 piR-53934-001 piR-50803-001 piR-61871-001 GOLGA2P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR7162 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR7162 Gene

Latest Assembly
chr10:30,368,597-30,368,665
(GRCh38/hg38)
Size:
69 bases
Orientation:
Minus strand

Previous Assembly
chr10:30,657,526-30,657,594
(GRCh37/hg19 by Entrez Gene)
Size:
69 bases
Orientation:
Minus strand

Genomic View for MIR7162 Gene

Genes around MIR7162 on UCSC Golden Path with GeneCards custom track
MIR7162 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR7162 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR7162 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR7162 Gene

Proteins for MIR7162 Gene

Post-translational modifications for MIR7162 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR7162 Gene

Domains & Families for MIR7162 Gene

Gene Families for MIR7162 Gene

HGNC:
genes like me logo Genes that share domains with MIR7162: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR7162 Gene

Function for MIR7162 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR7162 Gene

Localization for MIR7162 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR7162 Gene

Pathways & Interactions for MIR7162 Gene

PathCards logo

SuperPathways for MIR7162 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR7162 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR7162 Gene

Drugs & Compounds for MIR7162 Gene

No Compound Related Data Available

Transcripts for MIR7162 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR7162 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000075D9DE_9606 precursor_RNA 69 3

RefSeq: NR_106985,

Ensembl: ENST00000611134 (view in UCSC) ,

miRBase: MI0023623,

URS000075EA0F_9606 miRNA 19 2

RefSeq: NR_106985,

miRBase: MIMAT0028235,

URS000075B7A9_9606 miRNA 18 2

RefSeq: NR_106985,

miRBase: MIMAT0028234,

MIR7162 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR7162 Gene

No ASD Table

Relevant External Links for MIR7162 Gene

GeneLoc Exon Structure for
MIR7162

No data available for mRNA/cDNA for MIR7162 Gene

Expression for MIR7162 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR7162 Gene

mRNA differential expression in normal tissues according to GTEx for MIR7162 Gene

This gene is overexpressed in Testis (x12.8), Pituitary (x12.6), and Kidney - Cortex (x12.2).
genes like me logo Genes that share expression patterns with MIR7162: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR7162 Gene

Orthologs for MIR7162 Gene

Evolution for MIR7162 Gene

ENSEMBL:
Gene Tree for MIR7162 (if available)
TreeFam:
Gene Tree for MIR7162 (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR7162

No data available for Orthologs for MIR7162 Gene

Paralogs for MIR7162 Gene

No data available for Paralogs for MIR7162 Gene

Variants for MIR7162 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR7162 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR7162 Gene

Variant ID Type Subtype PubMed ID
nsv1129323 OTHER inversion 24896259
nsv1161936 CNV duplication 26073780
nsv507546 OTHER sequence alteration 20534489
nsv509349 CNV insertion 20534489
nsv831821 CNV loss 17160897
nsv947808 CNV duplication 23825009

Additional Variant Information for MIR7162 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR7162
Leiden Open Variation Database (LOVD)
MIR7162

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR7162 Gene

Disorders for MIR7162 Gene

Additional Disease Information for MIR7162

No disorders were found for MIR7162 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR7162 Gene

Publications for MIR7162 Gene

  1. Birth and expression evolution of mammalian microRNA genes. (PMID: 23034410) Meunier J … Kaessmann H (Genome research 2013) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR7162 Gene

Sources for MIR7162 Gene