MIR7107 Gene (RNA Gene)

MicroRNA 7107

GC12M121444
GIFtS:
8
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR7107 Gene

Data sources for MIR7107 Gene:

Subcategory (RNA class) for MIR7107 Gene

miRNA

Aliases for MIR7107 Gene

External Ids for MIR7107 Gene

Previous GeneCards Identifiers for MIR7107 Gene

  • GC12U901869

Summaries for MIR7107 Gene

Entrez Gene Summary for MIR7107 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR7107 Gene

MIR7107 (MicroRNA 7107) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Chromatin organization and Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3.

Additional gene information for MIR7107 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR7107 Gene

Genomics for MIR7107 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for MIR7107 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J121443 Enhancer 0.9 Ensembl ENCODE 250.7 +1.0 983 1.1 IKZF1 CTCF ZIC2 SIN3A REST ZNF639 MAX TRIM22 SMC3 RAD21 MIR7107 KDM2B FJ601684-089 RNF34 lnc-CAMKK2-1
GH12J121445 Enhancer 0.4 Ensembl ENCODE 250.7 -0.2 -249 0.8 ZNF189 MIR7107 ENSG00000258435 KDM2B HE856031-001 RNF34 lnc-CAMKK2-1
GH12J121449 Enhancer 0.7 FANTOM5 ENCODE 0.4 -7.5 -7504 3.9 IKZF1 SPI1 SMARCE1 MAZ ESRRA ZBTB33 MEF2D ZNF121 ENSG00000258435 MIR7107 HE856031-001 RNF34 KDM2B lnc-CAMKK2-1
GH12J121455 Enhancer 0.4 ENCODE 0.4 -12.5 -12463 1.8 ZSCAN4 ZFP3 ZNF248 ENSG00000258435 TMEM120B KDM2B HE856031-001 MIR7107 RNF34 lnc-CAMKK2-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR7107 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR7107 Gene

Latest Assembly
chr12:121,444,273-121,444,352
(GRCh38/hg38)
Size:
80 bases
Orientation:
Minus strand

Previous Assembly
chr12:121,882,076-121,882,155
(GRCh37/hg19 by Entrez Gene)
Size:
80 bases
Orientation:
Minus strand

Genomic View for MIR7107 Gene

Genes around MIR7107 on UCSC Golden Path with GeneCards custom track
MIR7107 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR7107 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR7107 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR7107 Gene

Proteins for MIR7107 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for MIR7107 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR7107 Gene

Domains & Families for MIR7107 Gene

Gene Families for MIR7107 Gene

HGNC:
genes like me logo Genes that share domains with MIR7107: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR7107 Gene

Function for MIR7107 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR7107 Gene

Localization for MIR7107 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR7107 Gene

Pathways & Interactions for MIR7107 Gene

genes like me logo Genes that share pathways with MIR7107: view

Pathways by source for MIR7107 Gene

Gene Ontology (GO) - Biological Process for MIR7107 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for MIR7107 Gene

Drugs & Compounds for MIR7107 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for MIR7107 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR7107 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075CB30_9606 precursor_RNA 80 3

RefSeq: NR_106957,

Ensembl: ENST00000611489 (view in UCSC) ,

miRBase: MI0022958,

URS0000759FB2_9606 miRNA 27 2

RefSeq: NR_106957,

miRBase: MIMAT0028112,

URS000075D394_9606 miRNA 22 2

RefSeq: NR_106957,

miRBase: MIMAT0028111,

MIR7107 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR7107 Gene

No ASD Table

Relevant External Links for MIR7107 Gene

GeneLoc Exon Structure for
MIR7107

No data available for mRNA/cDNA for MIR7107 Gene

Expression for MIR7107 Gene

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  1. Primer products for research
  2. Gene Expression Assays for research
No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR7107 Gene

Orthologs for MIR7107 Gene

Evolution for MIR7107 Gene

ENSEMBL:
Gene Tree for MIR7107 (if available)
TreeFam:
Gene Tree for MIR7107 (if available)

No data available for Orthologs for MIR7107 Gene

Paralogs for MIR7107 Gene

No data available for Paralogs for MIR7107 Gene

Variants for MIR7107 Gene

Products:

  1. SNP Genotyping and Copy Number Assays for research

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR7107 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for MIR7107 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR7107

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR7107 Gene

Disorders for MIR7107 Gene

Additional Disease Information for MIR7107

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MIR7107 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR7107 Gene

Publications for MIR7107 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

ExternalLinks

View latest publications for MIR7107 gene in Mastermind

Products for MIR7107 Gene

Sources for MIR7107 Gene