microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6887 Gene

Subcategory (RNA class) for MIR6887 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR6887 Gene

  • MicroRNA 6887 2 3 5
  • Hsa-Mir-6887 2 3
  • MIR6887 2 5
  • MicroRNA Mir-6887 3
  • MIMAT0027674 50
  • MIMAT0027675 50
  • MI0022734 50

External Ids for MIR6887 Gene

Previous GeneCards Identifiers for MIR6887 Gene

  • GC19U901841
  • GC19P035265
  • GC19P035581

Summaries for MIR6887 Gene

Entrez Gene Summary for MIR6887 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6887 Gene

MIR6887 (MicroRNA 6887) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Cardiac conduction and Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds.

Additional gene information for MIR6887 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6887 Gene

Genomics for MIR6887 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR6887 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6887 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR6887 Gene

Genomic Locations for MIR6887 Gene
chr19:35,122,700-35,122,764
(GRCh38/hg38)
Size:
65 bases
Orientation:
Plus strand

Genomic View for MIR6887 Gene

Genes around MIR6887 on UCSC Golden Path with GeneCards custom track
MIR6887 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR6887 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6887 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6887 Gene

Proteins for MIR6887 Gene

Post-translational modifications for MIR6887 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6887 Gene

Domains & Families for MIR6887 Gene

Gene Families for MIR6887 Gene

HGNC:
genes like me logo Genes that share domains with MIR6887: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6887 Gene

Function for MIR6887 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6887 Gene

Localization for MIR6887 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6887 Gene

Pathways & Interactions for MIR6887 Gene

genes like me logo Genes that share pathways with MIR6887: view

Pathways by source for MIR6887 Gene

Gene Ontology (GO) - Biological Process for MIR6887 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for MIR6887 Gene

Drugs & Compounds for MIR6887 Gene

No Compound Related Data Available

Transcripts for MIR6887 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR6887 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075E9EF_9606 precursor_RNA 65 4

HGNC: 50065,

RefSeq: NR_106947,

Ensembl: ENST00000622822 (view in UCSC) ,

miRBase: MI0022734,

URS000075BEF5_9606 miRNA 23 2

RefSeq: NR_106947,

miRBase: MIMAT0027674,

URS000075EA2A_9606 miRNA 21 2

RefSeq: NR_106947,

miRBase: MIMAT0027675,

MIR6887 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6887 Gene

No ASD Table

Relevant External Links for MIR6887 Gene

GeneLoc Exon Structure for
MIR6887

No data available for mRNA/cDNA for MIR6887 Gene

Expression for MIR6887 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6887 Gene

Orthologs for MIR6887 Gene

Evolution for MIR6887 Gene

ENSEMBL:
Gene Tree for MIR6887 (if available)
TreeFam:
Gene Tree for MIR6887 (if available)

No data available for Orthologs for MIR6887 Gene

Paralogs for MIR6887 Gene

No data available for Paralogs for MIR6887 Gene

Variants for MIR6887 Gene

Additional dbSNP identifiers (rs#s) for MIR6887 Gene

Additional Variant Information for MIR6887 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6887

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR6887 Gene

Disorders for MIR6887 Gene

Additional Disease Information for MIR6887

No disorders were found for MIR6887 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6887 Gene

Publications for MIR6887 Gene

  1. Dysregulated Pseudogene HK2P1 May Contribute to Preeclampsia as a Competing Endogenous RNA for Hexokinase 2 by Impairing Decidualization. (PMID: 29440331) Lv H … Chen ZJ (Hypertension (Dallas, Tex. : 1979) 2018) 3
  2. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR6887 Gene

Sources for MIR6887 Gene