microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6878 Gene

Data sources for MIR6878 Gene:

RNA type for MIR6878 Gene

miRNA

Aliases for MIR6878 Gene

External Ids for MIR6878 Gene

Previous GeneCards Identifiers for MIR6878 Gene

  • GC01U904009
  • GC01P150493
  • GC01P150495

Summaries for MIR6878 Gene

Entrez Gene Summary for MIR6878 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6878 Gene

MIR6878 (MicroRNA 6878) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are tRNA Aminoacylation and Gene Expression.

Additional gene information for MIR6878 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6878 Gene

Genomics for MIR6878 Gene

Genomic Locations for MIR6878 Gene

Latest Assembly
chr1:150,492,345-150,492,410
(GRCh38/hg38)
Size:
66 bases
Orientation:
Plus strand

Previous Assembly
chr1:150,464,821-150,464,886
(GRCh37/hg19 by Entrez Gene)
Size:
66 bases
Orientation:
Plus strand

Genomic View for MIR6878 Gene

Genes around MIR6878 on UCSC Golden Path with GeneCards custom track
MIR6878 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR6878 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6878 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6878 Gene

No data available for GeneHancer (GH) Regulatory Elements for MIR6878 Gene

Proteins for MIR6878 Gene

Post-translational modifications for MIR6878 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6878 Gene

Domains & Families for MIR6878 Gene

Gene Families for MIR6878 Gene

HGNC:
genes like me logo Genes that share domains with MIR6878: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6878 Gene

Function for MIR6878 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6878 Gene

Localization for MIR6878 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6878 Gene

Pathways & Interactions for MIR6878 Gene

PathCards logo

SuperPathways for MIR6878 Gene

genes like me logo Genes that share pathways with MIR6878: view

Pathways by source for MIR6878 Gene

Gene Ontology (GO) - Biological Process for MIR6878 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for MIR6878 Gene

Drugs & Compounds for MIR6878 Gene

No Compound Related Data Available

Transcripts for MIR6878 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR6878 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000759D80_9606 precursor_RNA 66 3

RefSeq: NR_106938,

Ensembl: ENST00000635784 (view in UCSC) ,

miRBase: MI0022725,

URS000075BBD5_9606 miRNA 23 2

RefSeq: NR_106938,

miRBase: MIMAT0027656,

URS000075D163_9606 miRNA 21 2

RefSeq: NR_106938,

miRBase: MIMAT0027657,

MIR6878 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6878 Gene

No ASD Table

Relevant External Links for MIR6878 Gene

GeneLoc Exon Structure for
MIR6878

No data available for mRNA/cDNA for MIR6878 Gene

Expression for MIR6878 Gene

No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6878 Gene

Orthologs for MIR6878 Gene

Evolution for MIR6878 Gene

ENSEMBL:
Gene Tree for MIR6878 (if available)
TreeFam:
Gene Tree for MIR6878 (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR6878

No data available for Orthologs for MIR6878 Gene

Paralogs for MIR6878 Gene

No data available for Paralogs for MIR6878 Gene

Variants for MIR6878 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR6878 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR6878 Gene

Variant ID Type Subtype PubMed ID
nsv1006838 CNV gain 25217958

Additional Variant Information for MIR6878 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6878
Leiden Open Variation Database (LOVD)
MIR6878

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR6878 Gene

Disorders for MIR6878 Gene

Additional Disease Information for MIR6878

No disorders were found for MIR6878 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6878 Gene

Publications for MIR6878 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR6878 Gene

Sources for MIR6878 Gene