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Aliases for MIR6876 Gene

Subcategory (RNA class) for MIR6876 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR6876 Gene

  • MicroRNA 6876 2 3 5
  • MicroRNA Mir-6876 3
  • Hsa-Mir-6876 3

External Ids for MIR6876 Gene

Previous GeneCards Identifiers for MIR6876 Gene

  • GC08U901866

Summaries for MIR6876 Gene

Entrez Gene Summary for MIR6876 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6876 Gene

MIR6876 (MicroRNA 6876) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6876 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6876 Gene

Genomics for MIR6876 Gene

GeneHancer (GH) Regulatory Elements for MIR6876 Gene

Promoters and enhancers for MIR6876 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025344 Enhancer 1 Ensembl ENCODE 600.7 -0.1 -126 4.1 SP1 ELF3 PPARG CREM IKZF1 BACH1 IKZF2 PKNOX1 GABPA CTBP1 MIR6876 DOCK5 GC08M025333 GC08M025315
GH08J025348 Enhancer 0.6 Ensembl dbSUPER 0.7 +3.8 3799 1.2 PRDM1 ZNF146 GC08M025333 MIR6876 DOCK5
GH08J025329 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -16.6 -16609 1.2 RXRA NFE2 NR2F2 HNF4A GNRH1 KCTD9 CDCA2 DOCK5 GC08M025315 MIR6876
GH08J025321 Enhancer 0.5 dbSUPER 0.3 -22.3 -22292 2.6 RUNX3 ZNF610 POLR2A SIN3A GC08M025315 DOCK5 GNRH1 MIR6876
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6876 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6876 Gene

Genomic Locations for MIR6876 Gene
chr8:25,345,402-25,345,474
(GRCh38/hg38)
Size:
73 bases
Orientation:
Plus strand

Genomic View for MIR6876 Gene

Genes around MIR6876 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6876 Gene

Proteins for MIR6876 Gene

Post-translational modifications for MIR6876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6876 Gene

Domains & Families for MIR6876 Gene

Gene Families for MIR6876 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6876: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6876 Gene

Function for MIR6876 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6876 Gene

Localization for MIR6876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6876 Gene

Pathways & Interactions for MIR6876 Gene

PathCards logo

SuperPathways for MIR6876 Gene

No Data Available

Interacting Proteins for MIR6876 Gene

Gene Ontology (GO) - Biological Process for MIR6876 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6876 Gene

Drugs & Compounds for MIR6876 Gene

No Compound Related Data Available

Transcripts for MIR6876 Gene

mRNA/cDNA for MIR6876 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6876 Gene

No ASD Table

Relevant External Links for MIR6876 Gene

GeneLoc Exon Structure for
MIR6876
ECgene alternative splicing isoforms for
MIR6876

Expression for MIR6876 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6876 Gene:

MIR6876
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6876 Gene

Orthologs for MIR6876 Gene

Evolution for MIR6876 Gene

ENSEMBL:
Gene Tree for MIR6876 (if available)
TreeFam:
Gene Tree for MIR6876 (if available)

No data available for Orthologs for MIR6876 Gene

Paralogs for MIR6876 Gene

No data available for Paralogs for MIR6876 Gene

Variants for MIR6876 Gene

Sequence variations from dbSNP and Humsavar for MIR6876 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1003492576 -- 25,344,990(+) T/A upstream_transcript_variant
rs1005577819 -- 25,343,646(+) G/T upstream_transcript_variant
rs1005971868 -- 25,343,960(+) C/A upstream_transcript_variant
rs1006376929 -- 25,344,422(+) T/G upstream_transcript_variant
rs1006924596 -- 25,344,167(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6876 Gene

Variant ID Type Subtype PubMed ID
esv3616666 OTHER inversion 21293372

Additional Variant Information for MIR6876 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6876

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6876 Gene

Disorders for MIR6876 Gene

Additional Disease Information for MIR6876

No disorders were found for MIR6876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6876 Gene

Publications for MIR6876 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6876 Gene

Sources for MIR6876 Gene

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