MIR6868 Gene (RNA Gene)

MicroRNA 6868

GC17M076098
GIFtS:
8
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6868 Gene

Data sources for MIR6868 Gene:

Subcategory (RNA class) for MIR6868 Gene

miRNA

Aliases for MIR6868 Gene

External Ids for MIR6868 Gene

Previous GeneCards Identifiers for MIR6868 Gene

  • GC17U902070

Summaries for MIR6868 Gene

Entrez Gene Summary for MIR6868 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6868 Gene

MIR6868 (MicroRNA 6868) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6868 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6868 Gene

Genomics for MIR6868 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for MIR6868 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J076102 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -5.8 -5756 2.9 TBP ZBTB10 MNT SMAD5 ETS1 MBD2 POLR2A ELF1 ZIC2 THAP11 lnc-ZACN-3 EXOC7 UNK SRSF2 ENSG00000267342 NUP85 GGA3 ENSG00000267546 ENSG00000266980 NT5C
GH17J076094 Enhancer 0.9 Ensembl ENCODE 0.7 +3.2 3153 0.6 ZNF395 NFATC3 ADNP FOSL1 HDAC2 TCF12 ZNF384 GLIS1 NR2F6 SP7 SRP68 HSALNG0118806 MIR6868 EXOC7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6868 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR6868 Gene

Latest Assembly
chr17:76,098,019-76,098,076
(GRCh38/hg38)
Size:
58 bases
Orientation:
Minus strand

Previous Assembly
chr17:74,094,100-74,094,157
(GRCh37/hg19 by Entrez Gene)
Size:
58 bases
Orientation:
Minus strand

Genomic View for MIR6868 Gene

Genes around MIR6868 on UCSC Golden Path with GeneCards custom track
MIR6868 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR6868 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6868 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR6868 Gene

Proteins for MIR6868 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for MIR6868 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6868 Gene

Domains & Families for MIR6868 Gene

Gene Families for MIR6868 Gene

HGNC:
genes like me logo Genes that share domains with MIR6868: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6868 Gene

Function for MIR6868 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6868 Gene

Localization for MIR6868 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6868 Gene

Pathways & Interactions for MIR6868 Gene

PathCards logo

SuperPathways for MIR6868 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR6868 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR6868 Gene

Drugs & Compounds for MIR6868 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for MIR6868 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR6868 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075EE35_9606 pre_miRNA 58 3

RefSeq: NR_106928,

Ensembl: ENST00000611215 (view in UCSC) ,

miRBase: MI0022715,

URS000075CE71_9606 miRNA 22 2

RefSeq: NR_106928,

miRBase: MIMAT0027636,

URS000075DF84_9606 miRNA 21 2

RefSeq: NR_106928,

miRBase: MIMAT0027637,

MIR6868 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6868 Gene

No ASD Table

Relevant External Links for MIR6868 Gene

GeneLoc Exon Structure for
MIR6868

No data available for mRNA/cDNA for MIR6868 Gene

Expression for MIR6868 Gene

Products:

  1. Primer products for research
  2. Gene Expression Assays for research
No Expression Related Data Available

Primer products for research

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6868 Gene

Orthologs for MIR6868 Gene

Evolution for MIR6868 Gene

ENSEMBL:
Gene Tree for MIR6868 (if available)
TreeFam:
Gene Tree for MIR6868 (if available)

No data available for Orthologs for MIR6868 Gene

Paralogs for MIR6868 Gene

No data available for Paralogs for MIR6868 Gene

Variants for MIR6868 Gene

Products:

  1. SNP Genotyping and Copy Number Assays for research

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR6868 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR6868 Gene

Variant ID Type Subtype PubMed ID
nsv509674 CNV insertion 20534489
nsv833546 CNV loss 17160897

Additional Variant Information for MIR6868 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6868

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR6868 Gene

Disorders for MIR6868 Gene

Additional Disease Information for MIR6868

Atlas
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MIR6868 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6868 Gene

Publications for MIR6868 Gene

  1. Dysregulation of miR-6868-5p/FOXM1 circuit contributes to colorectal cancer angiogenesis. (PMID: 30486864) Wang Y … Chu X (Journal of experimental & clinical cancer research : CR 2018) 3
  2. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

ExternalLinks

View latest publications for MIR6868 gene in Mastermind

Products for MIR6868 Gene

Sources for MIR6868 Gene