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Aliases for MIR6850 Gene

Subcategory (RNA class) for MIR6850 Gene

miRNA

Quality Score for this RNA gene is

18

Aliases for MIR6850 Gene

  • MicroRNA 6850 2 3 5
  • MicroRNA Mir-6850 3
  • Hsa-Mir-6850 3

External Ids for MIR6850 Gene

Previous GeneCards Identifiers for MIR6850 Gene

  • GC08U901926

Summaries for MIR6850 Gene

Entrez Gene Summary for MIR6850 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6850 Gene

MIR6850 (MicroRNA 6850) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are Viral mRNA Translation and Influenza Viral RNA Transcription and Replication.

Additional gene information for MIR6850 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6850 Gene

Genomics for MIR6850 Gene

GeneHancer (GH) Regulatory Elements for MIR6850 Gene

Promoters and enhancers for MIR6850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J144785 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.7 +2.3 2260 9 DMAP1 YY1 SLC30A9 E2F8 ZNF143 ZNF263 SP3 NFYC SSRP1 ZNF610 RPL8 ZNF34 PIR52884 VPS28 ZNF7 ZNF250 CPSF1 ZNF251 COMMD5 LRRC14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6850 Gene

Genomic Locations for MIR6850 Gene
chr8:144,791,931-144,791,991
(GRCh38/hg38)
Size:
61 bases
Orientation:
Minus strand

Genomic View for MIR6850 Gene

Genes around MIR6850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6850 Gene

ORGUL Member Location for MIR6850 Gene

ORGUL Member Location for MIR6850 gene

Proteins for MIR6850 Gene

Post-translational modifications for MIR6850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6850 Gene

Domains & Families for MIR6850 Gene

Gene Families for MIR6850 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6850: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6850 Gene

Function for MIR6850 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6850 Gene

Localization for MIR6850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6850 Gene

Pathways & Interactions for MIR6850 Gene

genes like me logo Genes that share pathways with MIR6850: view

Pathways by source for MIR6850 Gene

Interacting Proteins for MIR6850 Gene

Gene Ontology (GO) - Biological Process for MIR6850 Gene

None

No data available for SIGNOR curated interactions for MIR6850 Gene

Drugs & Compounds for MIR6850 Gene

No Compound Related Data Available

Transcripts for MIR6850 Gene

mRNA/cDNA for MIR6850 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6850 Gene

No ASD Table

Relevant External Links for MIR6850 Gene

GeneLoc Exon Structure for
MIR6850
ECgene alternative splicing isoforms for
MIR6850

Expression for MIR6850 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6850 Gene:

MIR6850
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6850 Gene

Orthologs for MIR6850 Gene

Evolution for MIR6850 Gene

ENSEMBL:
Gene Tree for MIR6850 (if available)
TreeFam:
Gene Tree for MIR6850 (if available)

No data available for Orthologs for MIR6850 Gene

Paralogs for MIR6850 Gene

No data available for Paralogs for MIR6850 Gene

Variants for MIR6850 Gene

Sequence variations from dbSNP and Humsavar for MIR6850 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1002056004 -- 144,792,813(-) G/T upstream_transcript_variant
rs1002823533 -- 144,793,907(-) C/T upstream_transcript_variant
rs1003653628 -- 144,793,579(-) A/T upstream_transcript_variant
rs1004132367 -- 144,793,850(-) C/G upstream_transcript_variant
rs1004369356 -- 144,791,953(-) G/C non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6850 Gene

Variant ID Type Subtype PubMed ID
nsv522459 CNV loss 19592680
nsv612969 CNV loss 21841781

Additional Variant Information for MIR6850 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6850

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6850 Gene

Disorders for MIR6850 Gene

Additional Disease Information for MIR6850

No disorders were found for MIR6850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6850 Gene

Publications for MIR6850 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6850 Gene

Sources for MIR6850 Gene

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