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Aliases for MIR6839 Gene

Subcategory (RNA class) for MIR6839 Gene


Quality Score for this RNA gene is


Aliases for MIR6839 Gene

  • MicroRNA 6839 2 3 5
  • MicroRNA Mir-6839 3
  • Hsa-Mir-6839 3

External Ids for MIR6839 Gene

Previous GeneCards Identifiers for MIR6839 Gene

  • GC07U903833

Summaries for MIR6839 Gene

Entrez Gene Summary for MIR6839 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6839 Gene

MIR6839 (MicroRNA 6839) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6839 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6839 Gene

Genomics for MIR6839 Gene

GeneHancer (GH) Regulatory Elements for MIR6839 Gene

Promoters and enhancers for MIR6839 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J064664 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -12.6 -12609 3.2 PKNOX1 SMAD1 ARID4B SIN3A DMAP1 YY1 POLR2B E2F8 ZNF207 ZNF143 ZNF107 CCT6P3 GTF2IP14 ZNF736 LOC441239 ERV3-1 SEPHS1P1 ZNF138 MIR6839
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR6839 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6839 Gene

Genomic Locations for MIR6839 Gene
113 bases
Plus strand

Genomic View for MIR6839 Gene

Genes around MIR6839 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6839 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6839 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6839 Gene

Proteins for MIR6839 Gene

Post-translational modifications for MIR6839 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6839 Gene

Domains & Families for MIR6839 Gene

Gene Families for MIR6839 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6839: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6839 Gene

Function for MIR6839 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6839 Gene

Localization for MIR6839 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6839 Gene

Pathways & Interactions for MIR6839 Gene

SuperPathways for MIR6839 Gene

No Data Available

Interacting Proteins for MIR6839 Gene

Gene Ontology (GO) - Biological Process for MIR6839 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR6839 Gene

Drugs & Compounds for MIR6839 Gene

No Compound Related Data Available

Transcripts for MIR6839 Gene

mRNA/cDNA for MIR6839 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(3) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6839 Gene

No ASD Table

Relevant External Links for MIR6839 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR6839 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6839 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6839 Gene

Orthologs for MIR6839 Gene

Evolution for MIR6839 Gene

Gene Tree for MIR6839 (if available)
Gene Tree for MIR6839 (if available)

No data available for Orthologs for MIR6839 Gene

Paralogs for MIR6839 Gene

No data available for Paralogs for MIR6839 Gene

Variants for MIR6839 Gene

Sequence variations from dbSNP and Humsavar for MIR6839 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000542270 -- 64,678,456(+) T/A upstream_transcript_variant
rs1003421325 -- 64,679,273(+) A/C downstream_transcript_variant
rs1003646049 -- 64,678,647(+) A/G upstream_transcript_variant
rs1003719780 -- 64,678,994(+) A/T upstream_transcript_variant
rs1003967975 -- 64,678,155(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6839 Gene

Variant ID Type Subtype PubMed ID
nsv970856 CNV duplication 23825009
nsv607312 CNV gain 21841781
nsv464518 CNV gain 19166990
nsv1018445 CNV gain 25217958
esv3571879 CNV loss 25503493
esv2764000 CNV gain+loss 21179565
esv2422405 CNV duplication 17116639
esv23182 CNV gain 19812545
dgv1099e201 CNV deletion 23290073

Additional Variant Information for MIR6839 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6839 Gene

Disorders for MIR6839 Gene

Additional Disease Information for MIR6839

No disorders were found for MIR6839 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6839 Gene

Publications for MIR6839 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6839 Gene

Sources for MIR6839 Gene

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