microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6818 Gene

Subcategory (RNA class) for MIR6818 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR6818 Gene

  • MicroRNA 6818 2 3 5
  • Hsa-Mir-6818 2 3
  • MIR6818 2 5
  • MicroRNA Mir-6818 3
  • MIMAT0027536 50
  • MIMAT0027537 50
  • MI0022663 50

External Ids for MIR6818 Gene

Previous GeneCards Identifiers for MIR6818 Gene

  • GC22U901006

Summaries for MIR6818 Gene

Entrez Gene Summary for MIR6818 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6818 Gene

MIR6818 (MicroRNA 6818) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6818 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6818 Gene

Genomics for MIR6818 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR6818 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J030005 Enhancer 0.9 Ensembl ENCODE 600.7 -1.9 -1945 1.1 CTCF ZNF143 ZIC2 RXRB REST RAD21 TRIM22 KMT2B ZBTB44 RUNX3 MIR6818 HORMAD2-AS1 MTMR3 ASCC2 ENSG00000279159 RF01061-108 HORMAD2 lnc-ASCC2-1
GH22J030008 Enhancer 0.6 Ensembl ENCODE CraniofacialAtlas 600.7 +1.6 1594 1.1 RCOR1 MIR6818 ASCC2 piR-32216 ENSG00000279159 HORMAD2 HORMAD2-AS1 lnc-ASCC2-1 MTMR3
GH22J030007 Enhancer 0.2 Ensembl 600.7 +0.5 452 0.2 MIR6818 piR-32216 ENSG00000279159 HORMAD2 lnc-ASCC2-1 MTMR3
GH22J029992 Enhancer 1 Ensembl ENCODE 0.4 -13.0 -13049 4.4 CEBPG GATAD2A PRDM10 ZNF629 CTCF PRDM1 ZIC2 PKNOX1 RXRB PATZ1 MTMR3 ASCC2 HORMAD2-AS1 RNU5F-5P LIF THOC5 MIR6818 ENSG00000279159 RF01061-108 HORMAD2
GH22J029979 Enhancer 1 Ensembl ENCODE 0.3 -27.4 -27425 1.6 PRDM10 ZNF629 ZNF692 ZNF300 PRDM1 ZNF776 PATZ1 ZNF600 ZNF341 ZNF37A RNF215 TUG1 MTMR3 ENSG00000272689 EWSR1 RNU5F-5P MORC2 ASCC2 MIR6818 RF01061-108
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6818 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR6818 Gene

Genomic Locations for MIR6818 Gene
chr22:30,007,049-30,007,113
(GRCh38/hg38)
Size:
65 bases
Orientation:
Plus strand

Genomic View for MIR6818 Gene

Genes around MIR6818 on UCSC Golden Path with GeneCards custom track
MIR6818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR6818 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6818 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6818 Gene

Proteins for MIR6818 Gene

Post-translational modifications for MIR6818 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6818 Gene

Domains & Families for MIR6818 Gene

Gene Families for MIR6818 Gene

HGNC:
genes like me logo Genes that share domains with MIR6818: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6818 Gene

Function for MIR6818 Gene

Phenotypes From GWAS Catalog for MIR6818 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6818 Gene

Localization for MIR6818 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6818 Gene

Pathways & Interactions for MIR6818 Gene

PathCards logo

SuperPathways for MIR6818 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR6818 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR6818 Gene

Drugs & Compounds for MIR6818 Gene

No Compound Related Data Available

Transcripts for MIR6818 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR6818 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075EB64_9606 precursor_RNA 65 4

HGNC: 49940,

RefSeq: NR_106876,

Ensembl: ENST00000621576 (view in UCSC) ,

miRBase: MI0022663,

URS000075B57E_9606 miRNA 22 2

RefSeq: NR_106876,

miRBase: MIMAT0027536,

URS000075D9FB_9606 miRNA 22 2

RefSeq: NR_106876,

miRBase: MIMAT0027537,

MIR6818 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6818 Gene

No ASD Table

Relevant External Links for MIR6818 Gene

GeneLoc Exon Structure for
MIR6818

No data available for mRNA/cDNA for MIR6818 Gene

Expression for MIR6818 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6818 Gene

Orthologs for MIR6818 Gene

Evolution for MIR6818 Gene

ENSEMBL:
Gene Tree for MIR6818 (if available)
TreeFam:
Gene Tree for MIR6818 (if available)

No data available for Orthologs for MIR6818 Gene

Paralogs for MIR6818 Gene

No data available for Paralogs for MIR6818 Gene

Variants for MIR6818 Gene

Additional dbSNP identifiers (rs#s) for MIR6818 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR6818 Gene

Variant ID Type Subtype PubMed ID
nsv1110864 OTHER inversion 24896259

Additional Variant Information for MIR6818 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6818

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR6818 Gene

Disorders for MIR6818 Gene

Additional Disease Information for MIR6818

No disorders were found for MIR6818 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6818 Gene

Publications for MIR6818 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR6818 Gene

Sources for MIR6818 Gene