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Aliases for MIR6811 Gene

Subcategory (RNA class) for MIR6811 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR6811 Gene

  • MicroRNA 6811 2 3 5
  • MicroRNA Mir-6811 3
  • Hsa-Mir-6811 3

External Ids for MIR6811 Gene

Previous GeneCards Identifiers for MIR6811 Gene

  • GC02U903018

Summaries for MIR6811 Gene

Entrez Gene Summary for MIR6811 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6811 Gene

MIR6811 (MicroRNA 6811) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6811 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6811 Gene

Genomics for MIR6811 Gene

GeneHancer (GH) Regulatory Elements for MIR6811 Gene

Promoters and enhancers for MIR6811 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J237508 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.2 245 5.5 ELF3 CTCF NCOA3 MAFK ELF1 SP1 PPARG ZNF384 RAD21 CREB1 MIR6811 LRRFIP1 MLPH RNU6-1140P PRLH ENSG00000234949 RAB17 ENSG00000222022 COL6A3
GH02J237485 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.3 -21.3 -21332 7.7 MTA3 SP1 NCOA3 MYC ELF1 POLR2A FOSL2 CREB1 REST ZNF692 MLPH ENSG00000222022 COL6A3 LOC105373957 MIR6811
GH02J237496 Enhancer 1.1 ENCODE dbSUPER 0.4 -10.4 -10438 7.5 MTA3 ELF3 NCOA3 MAFK ELF1 SP1 PPARG ZNF644 HDGF FOSL2 RNU6-1140P PRLH MLPH COL6A3 ENSG00000234949 RAB17 ENSG00000222022 ILKAP MIR6811 LOC105373957
GH02J237514 Enhancer 0.6 Ensembl dbSUPER 0.7 +3.9 3870 0.8 SP1 HNF4A MLPH MIR6811 RNU6-1140P
GH02J237517 Promoter 0.8 EPDnew 0.4 +7.1 7093 0.1 POLR2A TARDBP ZFHX2 EGR2 MLPH MIR6811 RNU6-1140P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6811 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6811 Gene

Genomic Locations for MIR6811 Gene
chr2:237,510,931-237,510,988
(GRCh38/hg38)
Size:
58 bases
Orientation:
Plus strand

Genomic View for MIR6811 Gene

Genes around MIR6811 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6811 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6811 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6811 Gene

Proteins for MIR6811 Gene

Post-translational modifications for MIR6811 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6811 Gene

Domains & Families for MIR6811 Gene

Gene Families for MIR6811 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6811: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6811 Gene

Function for MIR6811 Gene

Phenotypes From GWAS Catalog for MIR6811 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6811 Gene

Localization for MIR6811 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6811 Gene

Pathways & Interactions for MIR6811 Gene

PathCards logo

SuperPathways for MIR6811 Gene

No Data Available

Interacting Proteins for MIR6811 Gene

Gene Ontology (GO) - Biological Process for MIR6811 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6811 Gene

Drugs & Compounds for MIR6811 Gene

No Compound Related Data Available

Transcripts for MIR6811 Gene

mRNA/cDNA for MIR6811 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6811 Gene

No ASD Table

Relevant External Links for MIR6811 Gene

GeneLoc Exon Structure for
MIR6811
ECgene alternative splicing isoforms for
MIR6811

Expression for MIR6811 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6811 Gene:

MIR6811
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6811 Gene

Orthologs for MIR6811 Gene

Evolution for MIR6811 Gene

ENSEMBL:
Gene Tree for MIR6811 (if available)
TreeFam:
Gene Tree for MIR6811 (if available)

No data available for Orthologs for MIR6811 Gene

Paralogs for MIR6811 Gene

No data available for Paralogs for MIR6811 Gene

Variants for MIR6811 Gene

Sequence variations from dbSNP and Humsavar for MIR6811 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000924212 -- 237,511,471(+) A/G downstream_transcript_variant
rs1001497980 -- 237,509,269(+) A/C upstream_transcript_variant
rs1001589317 -- 237,509,017(+) G/A upstream_transcript_variant
rs1002369426 -- 237,510,357(+) C/A/T upstream_transcript_variant
rs1004747602 -- 237,509,333(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6811 Gene

Variant ID Type Subtype PubMed ID
nsv1000252 CNV loss 25217958
nsv584728 CNV loss 21841781

Additional Variant Information for MIR6811 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6811

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6811 Gene

Disorders for MIR6811 Gene

Additional Disease Information for MIR6811

No disorders were found for MIR6811 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6811 Gene

Publications for MIR6811 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6811 Gene

Sources for MIR6811 Gene

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