microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6801 Gene

Subcategory (RNA class) for MIR6801 Gene

miRNA

Number of RNA Genes sources:

1 / 14

Aliases for MIR6801 Gene

  • MicroRNA 6801 2 3 5
  • MicroRNA Mir-6801 3
  • Hsa-Mir-6801 3
  • MIMAT0027502 51
  • MIMAT0027503 51
  • MI0022646 51
  • MIR6801 2

External Ids for MIR6801 Gene

Previous GeneCards Identifiers for MIR6801 Gene

  • GC19U901880

Summaries for MIR6801 Gene

Entrez Gene Summary for MIR6801 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6801 Gene

MIR6801 (MicroRNA 6801) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6801 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6801 Gene

Genomics for MIR6801 Gene

GeneHancer (GH) Regulatory Elements for MIR6801 Gene

Promoters and enhancers for MIR6801 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J052221 Enhancer 0.2 ENCODE 500.7 +0.0 23 0.2 MIR6801 FPR3 ENSG00000268015 SIGLEC14 LOC105372449 PPP2R1A
GH19J052187 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -31.8 -31808 4.6 ZBTB40 ZNF217 EP300 SIN3A NRF1 TCF12 POLR2G SP1 PHF8 FOS PPP2R1A HSALNG0127299 ZNF836 ZNF175 ENSG00000269483 ZNF614 ZNF766 ZNF415 ZNF528 ENSG00000268225
GH19J052194 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -24.5 -24465 6.9 FOS RBM25 POLR2A NFIC ZFHX2 ADNP KDM1A ZMYM3 ZNF133 EGR2 FPR3 PPP2R1A ENSG00000268015 ZNF836 ZNF766 ZNF350 ZNF808 ZNF432 ZNF83 HSALNG0127299
GH19J052213 Enhancer 0.5 ENCODE 0.4 -9.9 -9917 0.2 TRIM28 CEBPG NFE2 DPF2 CEBPB SMARCE1 GATA3 ARID1B ENSG00000268015 MIR6801 HSALNG0127299 PPP2R1A
GH19J052212 Enhancer 0.5 ENCODE 0.4 -7.8 -7802 3.5 TRIM28 CEBPB CEBPG ATF2 AGO2 PKNOX1 ATF7 PPP2R1A ENSG00000268015 MIR6801 HSALNG0127299
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6801 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6801 Gene

Genomic Locations for MIR6801 Gene
chr19:52,222,020-52,222,098
(GRCh38/hg38)
Size:
79 bases
Orientation:
Plus strand

Genomic View for MIR6801 Gene

Genes around MIR6801 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6801 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6801 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6801 Gene

Proteins for MIR6801 Gene

Post-translational modifications for MIR6801 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6801 Gene

Domains & Families for MIR6801 Gene

Gene Families for MIR6801 Gene

HGNC:
genes like me logo Genes that share domains with MIR6801: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6801 Gene

Function for MIR6801 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6801 Gene

Localization for MIR6801 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6801 Gene

Pathways & Interactions for MIR6801 Gene

PathCards logo

SuperPathways for MIR6801 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR6801 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR6801 Gene

Drugs & Compounds for MIR6801 Gene

No Compound Related Data Available

Transcripts for MIR6801 Gene

mRNA/cDNA for MIR6801 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 miRBase transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6801 Gene

No ASD Table

Relevant External Links for MIR6801 Gene

GeneLoc Exon Structure for
MIR6801

Expression for MIR6801 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6801 Gene

Orthologs for MIR6801 Gene

Evolution for MIR6801 Gene

ENSEMBL:
Gene Tree for MIR6801 (if available)
TreeFam:
Gene Tree for MIR6801 (if available)

No data available for Orthologs for MIR6801 Gene

Paralogs for MIR6801 Gene

No data available for Paralogs for MIR6801 Gene

Variants for MIR6801 Gene

Additional dbSNP identifiers (rs#s) for MIR6801 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR6801 Gene

Variant ID Type Subtype PubMed ID
nsv1140251 OTHER inversion 24896259

Additional Variant Information for MIR6801 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6801

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR6801 Gene

Disorders for MIR6801 Gene

Additional Disease Information for MIR6801

No disorders were found for MIR6801 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6801 Gene

Publications for MIR6801 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 54
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 54

Products for MIR6801 Gene

Sources for MIR6801 Gene