microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR6798 Gene

Subcategory (RNA class) for MIR6798 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR6798 Gene

  • MicroRNA 6798 2 3 5
  • Hsa-Mir-6798 2 3
  • MIR6798 2 5
  • MicroRNA Mir-6798 3
  • MIMAT0027497 50
  • MIMAT0027496 50
  • MI0022643 50

External Ids for MIR6798 Gene

Previous GeneCards Identifiers for MIR6798 Gene

  • GC19U901835

Summaries for MIR6798 Gene

Entrez Gene Summary for MIR6798 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6798 Gene

MIR6798 (MicroRNA 6798) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6798 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6798 Gene

Genomics for MIR6798 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR6798 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J049009 Enhancer 0.3 Ensembl 600.7 -0.6 -605 0.2 ZNF362 NONHSAG026210.2 MIR6798 CGB7 NTF4 KCNA7 RUVBL2 SNRNP70 NUCB1-AS1 NUCB1 TULP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6798 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR6798 Gene

Genomic Locations for MIR6798 Gene
chr19:49,009,906-49,009,972
(GRCh38/hg38)
Size:
67 bases
Orientation:
Plus strand

Genomic View for MIR6798 Gene

Genes around MIR6798 on UCSC Golden Path with GeneCards custom track
MIR6798 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR6798 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6798 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6798 Gene

Proteins for MIR6798 Gene

Post-translational modifications for MIR6798 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6798 Gene

Domains & Families for MIR6798 Gene

Gene Families for MIR6798 Gene

HGNC:
genes like me logo Genes that share domains with MIR6798: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6798 Gene

Function for MIR6798 Gene

Phenotypes From GWAS Catalog for MIR6798 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6798 Gene

Localization for MIR6798 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6798 Gene

Pathways & Interactions for MIR6798 Gene

PathCards logo

SuperPathways for MIR6798 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR6798 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR6798 Gene

Drugs & Compounds for MIR6798 Gene

No Compound Related Data Available

Transcripts for MIR6798 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR6798 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075C9C1_9606 precursor_RNA 67 4

HGNC: 50013,

RefSeq: NR_106856,

Ensembl: ENST00000612887 (view in UCSC) ,

miRBase: MI0022643,

URS000075A1E5_9606 miRNA 23 2

RefSeq: NR_106856,

miRBase: MIMAT0027496,

URS000075C554_9606 miRNA 21 2

RefSeq: NR_106856,

miRBase: MIMAT0027497,

MIR6798 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6798 Gene

No ASD Table

Relevant External Links for MIR6798 Gene

GeneLoc Exon Structure for
MIR6798

No data available for mRNA/cDNA for MIR6798 Gene

Expression for MIR6798 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6798 Gene

Orthologs for MIR6798 Gene

Evolution for MIR6798 Gene

ENSEMBL:
Gene Tree for MIR6798 (if available)
TreeFam:
Gene Tree for MIR6798 (if available)

No data available for Orthologs for MIR6798 Gene

Paralogs for MIR6798 Gene

No data available for Paralogs for MIR6798 Gene

Variants for MIR6798 Gene

Additional dbSNP identifiers (rs#s) for MIR6798 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR6798 Gene

Variant ID Type Subtype PubMed ID
dgv3618n100 CNV gain 25217958
nsv833857 CNV loss 17160897
nsv833859 CNV loss 17160897
nsv953598 CNV deletion 24416366
nsv9739 CNV gain+loss 18304495

Additional Variant Information for MIR6798 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6798

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR6798 Gene

Disorders for MIR6798 Gene

Additional Disease Information for MIR6798

No disorders were found for MIR6798 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6798 Gene

Publications for MIR6798 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR6798 Gene

Sources for MIR6798 Gene