Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR6795 Gene

Subcategory (RNA class) for MIR6795 Gene

miRNA

Quality Score for this RNA gene is

18

Aliases for MIR6795 Gene

  • MicroRNA 6795 2 3 5
  • MicroRNA Mir-6795 3
  • Hsa-Mir-6795 3

External Ids for MIR6795 Gene

Previous GeneCards Identifiers for MIR6795 Gene

  • GC19U901849

Summaries for MIR6795 Gene

Entrez Gene Summary for MIR6795 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6795 Gene

MIR6795 (MicroRNA 6795) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6795 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6795 Gene

Genomics for MIR6795 Gene

GeneHancer (GH) Regulatory Elements for MIR6795 Gene

Promoters and enhancers for MIR6795 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J015177 Promoter/Enhancer 1.4 Ensembl ENCODE 600.7 +1.5 1549 1.2 HDGF ELF3 CTCF MLLT1 ZNF121 GTF2F1 RAD21 GLIS2 GMEB1 ZBTB33 MIR6795 NOTCH3 RNU6-782P
GH19J015178 Enhancer 0.4 ENCODE 600.7 +0.6 595 0.1 KLF9 KLF1 MIR6795 NOTCH3 RNU6-782P
GH19J015194 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -18.9 -18926 6.7 MTA3 SP1 ZNF121 ZBTB7A KLF14 HDGF FOSL2 CREB1 GLIS2 ZBTB8A NOTCH3 AKAP8 BRD4 EPHX3 RNU6-782P ZNF333 TPM4 OR7C1 MIR6795 GC19M015202
GH19J015180 Enhancer 0.8 ENCODE 0.7 -2.1 -2124 1.1 AHR TFE3 YY1 SP5 EGR1 KAT8 GMEB1 ZNF600 ATF1 HDAC1 EPHX3 RNU6-782P MIR6795 NOTCH3
GH19J015184 Enhancer 0.5 Ensembl 0.7 -4.8 -4751 0.2 CEBPG ZNF384 ZBTB33 CEBPA CEBPB EPHX3 RNU6-782P MIR6795 NOTCH3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6795 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6795 Gene

Genomic Locations for MIR6795 Gene
chr19:15,179,283-15,179,350
(GRCh38/hg38)
Size:
68 bases
Orientation:
Minus strand

Genomic View for MIR6795 Gene

Genes around MIR6795 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6795 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6795 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6795 Gene

ORGUL Member Location for MIR6795 Gene

ORGUL Member Location for MIR6795 gene

Proteins for MIR6795 Gene

Post-translational modifications for MIR6795 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6795 Gene

Domains & Families for MIR6795 Gene

Gene Families for MIR6795 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6795: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6795 Gene

Function for MIR6795 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6795 Gene

Localization for MIR6795 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6795 Gene

Pathways & Interactions for MIR6795 Gene

PathCards logo

SuperPathways for MIR6795 Gene

No Data Available

Interacting Proteins for MIR6795 Gene

Gene Ontology (GO) - Biological Process for MIR6795 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6795 Gene

Drugs & Compounds for MIR6795 Gene

No Compound Related Data Available

Transcripts for MIR6795 Gene

mRNA/cDNA for MIR6795 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6795 Gene

No ASD Table

Relevant External Links for MIR6795 Gene

GeneLoc Exon Structure for
MIR6795
ECgene alternative splicing isoforms for
MIR6795

Expression for MIR6795 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6795 Gene:

MIR6795
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6795 Gene

Orthologs for MIR6795 Gene

Evolution for MIR6795 Gene

ENSEMBL:
Gene Tree for MIR6795 (if available)
TreeFam:
Gene Tree for MIR6795 (if available)

No data available for Orthologs for MIR6795 Gene

Paralogs for MIR6795 Gene

No data available for Paralogs for MIR6795 Gene

Variants for MIR6795 Gene

Sequence variations from dbSNP and Humsavar for MIR6795 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs10408676 benign, not specified, Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy 15,179,196(-) C/T downstream_transcript_variant
rs1064794216 pathogenic-likely-pathogenic, not provided 15,180,217(-) C/T upstream_transcript_variant
rs112197217 benign, likely-benign, not specified, Cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy 15,179,425(-) G/A/C/T upstream_transcript_variant
rs1167405466 pathogenic-likely-pathogenic, not provided 15,180,761(-) T/C upstream_transcript_variant
rs199638166 uncertain-significance, not provided, not specified 15,179,079(-) A/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6795 Gene

Variant ID Type Subtype PubMed ID
dgv3439n100 CNV gain 25217958
dgv3440n100 CNV gain 25217958
dgv3441n100 CNV gain 25217958
esv34154 CNV loss 18971310
nsv578717 CNV loss 21841781

Additional Variant Information for MIR6795 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6795

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6795 Gene

Disorders for MIR6795 Gene

Additional Disease Information for MIR6795

No disorders were found for MIR6795 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6795 Gene

Publications for MIR6795 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6795 Gene

Sources for MIR6795 Gene

Content
Loading form....