Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR6794 Gene

Subcategory (RNA class) for MIR6794 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR6794 Gene

  • MicroRNA 6794 2 3 5
  • MicroRNA Mir-6794 3
  • Hsa-Mir-6794 3

External Ids for MIR6794 Gene

Previous GeneCards Identifiers for MIR6794 Gene

  • GC19U901807

Summaries for MIR6794 Gene

Entrez Gene Summary for MIR6794 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6794 Gene

MIR6794 (MicroRNA 6794) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6794 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6794 Gene

Genomics for MIR6794 Gene

GeneHancer (GH) Regulatory Elements for MIR6794 Gene

Promoters and enhancers for MIR6794 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J012847 Promoter/Enhancer 1.5 Ensembl ENCODE 0.7 -4.6 -4559 1 ELF3 CTCF ZNF148 ZNF121 GTF2F1 TFE3 SP7 PPARG KLF14 PRDM1 DNASE2 GC19M012845 MIR6794 MAST1 HOOK2
GH19J012866 Promoter/Enhancer 1.4 Ensembl ENCODE 0.4 +15.2 15241 1.4 HDGF ZNF384 ZBTB7A SP7 MLLT1 EGR1 GLIS2 GMEB1 POLR2A ZBTB8A WDR83OS HOOK2 MIR6794 MAST1
GH19J012868 Enhancer 0.6 ENCODE 0.4 +16.7 16672 0.1 SP1 GLIS2 PKNOX1 ZNF692 SP2 DDX20 NFYA NFYB ZFP69B ZNF621 ZNF20 ZNF878 ZNF44 ZNF433 ENSG00000230310 ZNF563 SYCE2 ZNF763 HOOK2 MIR6794
GH19J012870 Enhancer 0.5 Ensembl 0.4 +18.4 18441 0.6 ZNF341 CEBPB HIC1 GLIS1 ZBTB33 ZNF362 DNASE2 HOOK2 MIR6794 MAST1
GH19J012854 Enhancer 0.2 Ensembl 0.7 +2.6 2641 0.2 MIR6794 HOOK2 MAST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6794 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6794 Gene

Genomic Locations for MIR6794 Gene
chr19:12,852,260-12,852,327
(GRCh38/hg38)
Size:
68 bases
Orientation:
Plus strand

Genomic View for MIR6794 Gene

Genes around MIR6794 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6794 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6794 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6794 Gene

Proteins for MIR6794 Gene

Post-translational modifications for MIR6794 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6794 Gene

Domains & Families for MIR6794 Gene

Gene Families for MIR6794 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6794: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6794 Gene

Function for MIR6794 Gene

Phenotypes From GWAS Catalog for MIR6794 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6794 Gene

Localization for MIR6794 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6794 Gene

Pathways & Interactions for MIR6794 Gene

PathCards logo

SuperPathways for MIR6794 Gene

No Data Available

Interacting Proteins for MIR6794 Gene

Gene Ontology (GO) - Biological Process for MIR6794 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6794 Gene

Drugs & Compounds for MIR6794 Gene

No Compound Related Data Available

Transcripts for MIR6794 Gene

mRNA/cDNA for MIR6794 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6794 Gene

No ASD Table

Relevant External Links for MIR6794 Gene

GeneLoc Exon Structure for
MIR6794
ECgene alternative splicing isoforms for
MIR6794

Expression for MIR6794 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6794 Gene:

MIR6794
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6794 Gene

Orthologs for MIR6794 Gene

Evolution for MIR6794 Gene

ENSEMBL:
Gene Tree for MIR6794 (if available)
TreeFam:
Gene Tree for MIR6794 (if available)

No data available for Orthologs for MIR6794 Gene

Paralogs for MIR6794 Gene

No data available for Paralogs for MIR6794 Gene

Variants for MIR6794 Gene

Sequence variations from dbSNP and Humsavar for MIR6794 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1006045894 -- 12,851,469(+) G/T upstream_transcript_variant
rs1006098467 -- 12,851,879(+) G/C upstream_transcript_variant
rs1006378000 -- 12,852,707(+) A/T downstream_transcript_variant
rs1007675187 -- 12,851,420(+) C/A upstream_transcript_variant
rs1008497665 -- 12,850,263(+) A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6794 Gene

Variant ID Type Subtype PubMed ID
nsv2420 CNV insertion 18451855
nsv953977 CNV deletion 24416366

Additional Variant Information for MIR6794 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6794

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6794 Gene

Disorders for MIR6794 Gene

Additional Disease Information for MIR6794

No disorders were found for MIR6794 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6794 Gene

Publications for MIR6794 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6794 Gene

Sources for MIR6794 Gene

Content
Loading form....