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Aliases for MIR6792 Gene

Subcategory (RNA class) for MIR6792 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for MIR6792 Gene

  • MicroRNA 6792 2 3 5
  • MicroRNA Mir-6792 3
  • Hsa-Mir-6792 3

External Ids for MIR6792 Gene

Previous GeneCards Identifiers for MIR6792 Gene

  • GC19U901870

Summaries for MIR6792 Gene

Entrez Gene Summary for MIR6792 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR6792 Gene

MIR6792 (MicroRNA 6792) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR6792 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR6792 Gene

Genomics for MIR6792 Gene

GeneHancer (GH) Regulatory Elements for MIR6792 Gene

Promoters and enhancers for MIR6792 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007616 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 +1.0 999 4.9 NFIB NCOA3 SP1 RXRA ZNF300 ZNF776 ZNF341 ZFX SP2 SCRT2 MIR6792 XAB2 ELAVL1 HNRNPM PET100 PCP2 CAMSAP3 ZNF414 CLEC4G MAP2K7
GH19J007595 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.3 -21.2 -21238 2 SP7 SP5 GLIS2 PRDM10 ZIC2 ZSCAN4 ZEB2 PATZ1 ZNF692 NRF1 CAMSAP3 XAB2 ELAVL1 HNRNPM ZNF414 PCP2 MIR6792
GH19J007605 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -11.2 -11238 3.6 ZBTB33 PKNOX1 ZSCAN4 ZNF341 NRF1 SP2 ZNF766 HDGF ZBTB17 MBD2 XAB2 PET100 HNRNPM ZNF557 ELAVL1 ZNF414 MAP2K7 CD209 RPL21P129 CLEC4G
GH19J007597 Promoter/Enhancer 0.8 Ensembl dbSUPER 0.4 -19.9 -19938 0.2 ZBTB20 CAMSAP3 MIR6792
GH19J007600 Enhancer 0.2 FANTOM5 0.4 -17.2 -17190 0.3 XAB2 PET100 CD209 RPL21P129 ARHGEF18 CLEC4G CAMSAP3 PNPLA6 INSR MIR6792
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR6792 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR6792 Gene

Genomic Locations for MIR6792 Gene
chr19:7,617,439-7,617,505
(GRCh38/hg38)
Size:
67 bases
Orientation:
Plus strand

Genomic View for MIR6792 Gene

Genes around MIR6792 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR6792 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR6792 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR6792 Gene

Proteins for MIR6792 Gene

Post-translational modifications for MIR6792 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR6792 Gene

Domains & Families for MIR6792 Gene

Gene Families for MIR6792 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR6792: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR6792 Gene

Function for MIR6792 Gene

Phenotypes From GWAS Catalog for MIR6792 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6792 Gene

Localization for MIR6792 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6792 Gene

Pathways & Interactions for MIR6792 Gene

PathCards logo

SuperPathways for MIR6792 Gene

No Data Available

Interacting Proteins for MIR6792 Gene

Gene Ontology (GO) - Biological Process for MIR6792 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR6792 Gene

Drugs & Compounds for MIR6792 Gene

No Compound Related Data Available

Transcripts for MIR6792 Gene

mRNA/cDNA for MIR6792 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR6792 Gene

No ASD Table

Relevant External Links for MIR6792 Gene

GeneLoc Exon Structure for
MIR6792
ECgene alternative splicing isoforms for
MIR6792

Expression for MIR6792 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR6792 Gene:

MIR6792
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6792 Gene

Orthologs for MIR6792 Gene

Evolution for MIR6792 Gene

ENSEMBL:
Gene Tree for MIR6792 (if available)
TreeFam:
Gene Tree for MIR6792 (if available)

No data available for Orthologs for MIR6792 Gene

Paralogs for MIR6792 Gene

No data available for Paralogs for MIR6792 Gene

Variants for MIR6792 Gene

Sequence variations from dbSNP and Humsavar for MIR6792 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1002188728 -- 7,616,067(+) G/A upstream_transcript_variant
rs1002539796 -- 7,616,387(+) C/A/G upstream_transcript_variant
rs1002844942 -- 7,616,214(+) G/A/T upstream_transcript_variant
rs1003597312 -- 7,617,192(+) C/T upstream_transcript_variant
rs1005863809 -- 7,616,155(+) CC/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR6792 Gene

Variant ID Type Subtype PubMed ID
esv2751809 CNV gain 17911159
esv993190 CNV deletion 20482838
nsv1060887 CNV gain 25217958
nsv833730 CNV loss 17160897
nsv833731 CNV loss 17160897
nsv953958 CNV deletion 24416366

Additional Variant Information for MIR6792 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR6792

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6792 Gene

Disorders for MIR6792 Gene

Additional Disease Information for MIR6792

No disorders were found for MIR6792 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6792 Gene

Publications for MIR6792 Gene

  1. Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR6792 Gene

Sources for MIR6792 Gene

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