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microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...
Aliases for MIR6779 Gene
Subcategory (RNA class) for MIR6779 Gene
miRNA
Quality Score for this RNA gene is
13
Aliases for MIR6779 Gene
External Ids for MIR6779 Gene
- HGNC: 50148
- Entrez Gene: 102465467
- Ensembl: ENSG00000277057
Previous GeneCards Identifiers for MIR6779 Gene
- GC17U902049
Summaries for MIR6779 Gene
-
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
GeneCards Summary for MIR6779 Gene
MIR6779 (MicroRNA 6779) is an RNA Gene, and is affiliated with the miRNA class.
Additional gene information for MIR6779 Gene
No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR6779 Gene
Genomics for MIR6779 Gene
GeneHancer (GH) Regulatory Elements for MIR6779 Gene
Promoters and enhancers for MIR6779 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH17J038913 | Enhancer | 1 | ENCODE dbSUPER | 750.6 | +0.0 | 9 | 2.3 | MLX RBPJ NR2F1 NR2F6 MIXL1 CTCF ELF3 AHR SP1 TFE3 | MIR6779 lnc-LINC00672-1 ENSG00000266588 LINC00672 STARD3 LASP1 | |
| GH17J038910 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.6 | -2.7 | -2664 | 2.2 | SREBF1 SP1 RXRA ZBTB33 RCOR1 NR2F2 RAD21 HNF4A MAX HNF4G | PLXDC1 LINC00672 MIR6779 ENSG00000263466 LASP1 | |
| GH17J038908 | Enhancer | 0.6 | ENCODE dbSUPER | 0.4 | -6.2 | -6156 | 0.2 | RELA ZIC2 MAX | ENSG00000263466 MIR6779 LASP1 | |
| GH17J038906 | Enhancer | 0.3 | ENCODE dbSUPER | 0.4 | -8.0 | -7994 | 0.3 | ENSG00000263466 MIR6779 LASP1 | ||
| GH17J038907 | Enhancer | 0.2 | dbSUPER | 0.4 | -6.8 | -6827 | 0.5 | ENSG00000263466 MIR6779 LASP1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around MIR6779 on UCSC Golden Path with GeneCards custom track
Genomic Locations for MIR6779 Gene
Genomic Locations for MIR6779 Gene
- chr17:38,914,979-38,915,042
- (GRCh38/hg38)
- Size:
- 64 bases
- Orientation:
- Plus strand
Genomic View for MIR6779 Gene
Genes around MIR6779 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 17q12 by HGNC
- 17q12 by Entrez Gene
- 17q12 by Ensembl
MIR6779 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for MIR6779 Gene
Proteins for MIR6779 Gene
Post-translational modifications for MIR6779 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR6779
- Origene Custom Protein Services for MIR6779
No data available for DME Specific Peptides for MIR6779 Gene
Domains & Families for MIR6779 Gene
No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR6779 Gene
Function for MIR6779 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR6779 Gene
Localization for MIR6779 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR6779 Gene
Transcripts for MIR6779 Gene
mRNA/cDNA for MIR6779 Gene
- (1) REFSEQ mRNAs :
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000617283 64 bps (ENST00000617283.1)
- (3) RNACentral transcripts :
- (3) miRBase transcripts :
CRISPR Products
- Browse CRISPR knockouts for MIR6779
miRNA Products
Inhibitory RNA Products
Clone Products
Expression for MIR6779 Gene
NURSA nuclear receptor signaling pathways regulating expression of MIR6779 Gene:
MIR6779
No Expression Related Data Available
Primer Products
-
OriGene qPCR primer pairs for MIR6779
Gene Expression Assay Products
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR6779 Gene
Orthologs for MIR6779 Gene
No data available for Orthologs for MIR6779 Gene
Paralogs for MIR6779 Gene
No data available for Paralogs for MIR6779 Gene
Variants for MIR6779 Gene
| SNP ID | Clin | Chr 17 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1001188027 | -- | 38,913,967(+) | A/C | upstream_transcript_variant | |
| rs1001428672 | -- | 38,914,139(+) | A/T | upstream_transcript_variant | |
| rs1001637458 | -- | 38,915,448(+) | A/G | downstream_transcript_variant | |
| rs1002469183 | -- | 38,915,183(+) | A/T | downstream_transcript_variant | |
| rs1003324933 | -- | 38,913,943(+) | G/A | upstream_transcript_variant |
Additional Variant Information for MIR6779 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- MIR6779
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR6779 Gene
Disorders for MIR6779 Gene
Additional Disease Information for MIR6779
No disorders were found for MIR6779 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR6779 Gene
Publications for MIR6779 Gene
- Discovery of hundreds of mirtrons in mouse and human small RNA data. (PMID: 22955976) Ladewig E … Lai EC (Genome research 2012) 3 56
- miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 56
ExternalLinks
Products for MIR6779 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for MIR6779
- Origene Custom Protein Services for MIR6779
- Browse OriGene Inhibitory RNA Products For MIR6779
- OriGene qPCR primer pairs for MIR6779
- Browse CRISPR knockouts for MIR6779
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For MIR6779
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for MIR6779
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for MIR6779
- Search GeneCopoeia for miRNA 3'UTR Target clone products for MIR6779
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for MIR6779
Sources for MIR6779 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource