Aliases for MIR670HG Gene

Subcategory (RNA class) for MIR670HG Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for MIR670HG Gene

  • MIR670 Host Gene 2 3 5
  • MIR670HG 2 5 165
  • MIR670 Host Gene (Non-Protein Coding) 2 3
  • NONHSAG008123.2 91
  • HSALNG0083832 164

External Ids for MIR670HG Gene

Previous GeneCards Identifiers for MIR670HG Gene

  • GC11P043579
  • GC11P043563
  • GC11P043615
  • GC11P043624
  • GC11P043620
  • GC11P043631
  • GC11P043572
  • GC11P043575
  • GC11P043588
  • GC11P043597
  • GC11P043605
  • GC11P043614

Summaries for MIR670HG Gene

GeneCards Summary for MIR670HG Gene

MIR670HG (MIR670 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for MIR670HG Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR670HG Gene

Genomics for MIR670HG Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR670HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J043833 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 10.4 +265.0 265026 2.3 RFX1 POLR2A CEBPA RFX3 CEBPB FOXA2 FEZF1 GATA2 SPI1 LOC107984328 HSD17B12 MIR670HG MIR670 ALKBH3-AS1 MIR129-2 NONHSAG008131.2 ENSG00000283375 ALKBH3 ENSG00000246250
GH11J043817 Enhancer 0.7 Ensembl ENCODE 10.4 +249.6 249566 2.6 PKNOX1 HMBOX1 BATF TBX21 NFE2 MTA2 MLLT1 HSD17B12 ALKBH3 ENSG00000246250 MIR670HG MIR670 MIR129-2 piR-56341-026 NONHSAG008131.2 ENSG00000283341
GH11J043574 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 +6.7 6688 2.1 CREB1 CTCF ZNF629 REST TFE3 IKZF1 ZNF7 PRDM1 ZNF143 MTA2 HSD17B12 MIR670HG ENSG00000283217 TTC17
GH11J043573 Enhancer 0.5 Ensembl 0.7 +4.9 4895 0.8 POLR2A CTCF EZH2 KLF17 KLF1 HSD17B12 MIR670HG ENSG00000283217 TTC17
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR670HG on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR670HG Gene

Genomic Locations for MIR670HG Gene
chr11:43,569,306-43,570,400
(GRCh38/hg38)
Size:
1,095 bases
Orientation:
Plus strand
chr11:43,578,308-43,591,945
(GRCh37/hg19)
Size:
13,638 bases
Orientation:
Plus strand

Genomic View for MIR670HG Gene

Genes around MIR670HG on UCSC Golden Path with GeneCards custom track
MIR670HG in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR670HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR670HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR670HG Gene

Proteins for MIR670HG Gene

Post-translational modifications for MIR670HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR670HG Gene

Domains & Families for MIR670HG Gene

Gene Families for MIR670HG Gene

genes like me logo Genes that share domains with MIR670HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR670HG Gene

Function for MIR670HG Gene

Phenotypes From GWAS Catalog for MIR670HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR670HG Gene

Localization for MIR670HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR670HG Gene

Pathways & Interactions for MIR670HG Gene

PathCards logo

SuperPathways for MIR670HG Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR670HG Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR670HG Gene

Drugs & Compounds for MIR670HG Gene

No Compound Related Data Available

Transcripts for MIR670HG Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR670HG Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B23F9_9606 lncRNA 897 4

Ensembl: ENST00000533531 (view in UCSC) ,

LncBook: HSALNT0174560,

LNCipedia: MIR670HG:22,

NONCODE: NONHSAT018938.2,

URS00008120ED_9606 lncRNA 902 2

HGNC: 49204,

RefSeq: NR_131246,

URS00008BA5AC_9606 lncRNA 378 3

LncBook: HSALNT0174554,

LNCipedia: MIR670HG:21,

NONCODE: NONHSAT018935.2,

URS0000D5A48A_9606 lncRNA 902 1

LNCipedia: MIR670HG:6,

URS00008C031D_9606 lncRNA 558 1

LNCipedia: MIR670HG:19,

MIR670HG in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MIR670HG Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR670HG Gene

No ASD Table

Relevant External Links for MIR670HG Gene

GeneLoc Exon Structure for
MIR670HG

Expression for MIR670HG Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR670HG Gene

mRNA differential expression in normal tissues according to GTEx for MIR670HG Gene

This gene is overexpressed in Testis (x40.6).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR670HG

genes like me logo Genes that share expression patterns with MIR670HG: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR670HG Gene

Orthologs for MIR670HG Gene

Evolution for MIR670HG Gene

ENSEMBL:
Gene Tree for MIR670HG (if available)
TreeFam:
Gene Tree for MIR670HG (if available)

No data available for Orthologs for MIR670HG Gene

Paralogs for MIR670HG Gene

No data available for Paralogs for MIR670HG Gene

Variants for MIR670HG Gene

Additional dbSNP identifiers (rs#s) for MIR670HG Gene

Additional Variant Information for MIR670HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR670HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR670HG Gene

Disorders for MIR670HG Gene

No disorders were found for MIR670HG Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR670HG Gene

Publications for MIR670HG Gene

No publications were found for MIR670HG Gene.

No data available for Mastermind for MIR670HG Gene

Products for MIR670HG Gene

Sources for MIR670HG Gene