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Aliases for MIR642B Gene

Subcategory (RNA class) for MIR642B Gene


Quality Score for this RNA gene is


Aliases for MIR642B Gene

  • MicroRNA 642b 2 3 5
  • Hsa-Mir-642b 3
  • Mir-642b 3

External Ids for MIR642B Gene

Previous GeneCards Identifiers for MIR642B Gene

  • GC19U901469
  • GC19M046181

Summaries for MIR642B Gene

Entrez Gene Summary for MIR642B Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR642B Gene

MIR642B (MicroRNA 642b) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR642B Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR642B Gene

Genomics for MIR642B Gene

GeneHancer (GH) Regulatory Elements for MIR642B Gene

Promoters and enhancers for MIR642B Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I045676 Enhancer 0.5 ENCODE 550.8 -1.8 -1765 0.1 ZBTB49 POLR2B BACH1 PRDM10 SUPT5H EZH2 GC19P045675 GC19P045676 MIR642A MIR642B CLASRP CCDC61 SYMPK FBXO46 ENSG00000268810 ENSG00000269148
GH19I045677 Promoter/Enhancer 1.3 Ensembl ENCODE 0.8 -2.5 -2517 1.4 HDGF ELF3 CTCF PKNOX1 ZNF449 BACH1 SIN3A ZBTB7B TEAD3 ZFHX2 SNRPD2 CCDC61 GIPR PNMA8A GC19M045670 MIR642B GC19P045665
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR642B on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR642B Gene

Genomic Locations for MIR642B Gene
77 bases
Minus strand

Genomic View for MIR642B Gene

Genes around MIR642B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR642B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR642B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR642B Gene

ORGUL Member Location for MIR642B Gene

ORGUL Member Location for MIR642B gene

Proteins for MIR642B Gene

Post-translational modifications for MIR642B Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR642B Gene

Domains & Families for MIR642B Gene

Gene Families for MIR642B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR642B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR642B Gene

Function for MIR642B Gene

Phenotypes From GWAS Catalog for MIR642B Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR642B Gene

Localization for MIR642B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR642B Gene

Pathways & Interactions for MIR642B Gene

SuperPathways for MIR642B Gene

No Data Available

Interacting Proteins for MIR642B Gene

Gene Ontology (GO) - Biological Process for MIR642B Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR642B Gene

Drugs & Compounds for MIR642B Gene

No Compound Related Data Available

Transcripts for MIR642B Gene

mRNA/cDNA for MIR642B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR642B Gene

No ASD Table

Relevant External Links for MIR642B Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR642B Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR642B Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR642B Gene

Orthologs for MIR642B Gene

Evolution for MIR642B Gene

Gene Tree for MIR642B (if available)
Gene Tree for MIR642B (if available)

No data available for Orthologs for MIR642B Gene

Paralogs for MIR642B Gene

No data available for Paralogs for MIR642B Gene

Variants for MIR642B Gene

Sequence variations from dbSNP and Humsavar for MIR642B Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000773495 -- 45,674,830(-) G/A downstream_transcript_variant
rs1002804291 -- 45,676,502(-) C/A/G upstream_transcript_variant
rs1003079576 -- 45,676,152(-) G/A upstream_transcript_variant
rs1004805419 -- 45,675,827(-) G/A upstream_transcript_variant
rs1004926418 -- 45,675,450(-) C/T upstream_transcript_variant

Additional Variant Information for MIR642B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR642B Gene

Disorders for MIR642B Gene

Additional Disease Information for MIR642B

No disorders were found for MIR642B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR642B Gene

Publications for MIR642B Gene

  1. MicroRNA expression profiling in Guillain-Barré syndrome. (PMID: 27836180) Lv Z … Wang Y (Journal of neuroimmunology 2016) 3 58
  2. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3 58
  3. Ultra-high throughput sequencing-based small RNA discovery and discrete statistical biomarker analysis in a collection of cervical tumours and matched controls. (PMID: 20459774) Witten D … Lui WO (BMC biology 2010) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR642B Gene

Sources for MIR642B Gene

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