MIR5702 Gene (RNA Gene)

MicroRNA 5702

GC02M226658
GIFtS:
10
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR5702 Gene

Subcategory (RNA class) for MIR5702 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR5702 Gene

  • MicroRNA 5702 2 3 5
  • Hsa-Mir-5702 2 3
  • MIR5702 2 5
  • MIMAT0022495 50
  • MI0019309 50

External Ids for MIR5702 Gene

Previous GeneCards Identifiers for MIR5702 Gene

  • GC02U902495
  • GC02M227525

Summaries for MIR5702 Gene

Entrez Gene Summary for MIR5702 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5702 Gene

MIR5702 (MicroRNA 5702) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5702 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR5702 Gene

Genomics for MIR5702 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for MIR5702 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J226655 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.4 -356 7.7 GATAD2A ATF7 PRDM10 REST ZNF629 SOX13 ZNF692 RCOR2 JUND GABPA MIR5702 IRS1 lnc-IRS1-7
GH02J226649 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.0 6960 5.5 GATAD2A PRDM10 ZNF629 TFE3 SOX13 NFKBIZ RCOR2 ZNF7 ZIC2 RXRB IRS1 piR-50129-134 MIR5702 lnc-IRS1-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR5702 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR5702 Gene

Genomic Locations for MIR5702 Gene
chr2:226,658,710-226,658,793
(GRCh38/hg38)
Size:
84 bases
Orientation:
Minus strand
chr2:227,523,426-227,523,509
(GRCh37/hg19)
Size:
84 bases
Orientation:
Minus strand

Genomic View for MIR5702 Gene

Genes around MIR5702 on UCSC Golden Path with GeneCards custom track
MIR5702 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR5702 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5702 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for MIR5702 Gene

Proteins for MIR5702 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for MIR5702 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5702 Gene

Domains & Families for MIR5702 Gene

Gene Families for MIR5702 Gene

HGNC:
genes like me logo Genes that share domains with MIR5702: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR5702 Gene

Function for MIR5702 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for MIR5702 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5702 Gene

Localization for MIR5702 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5702 Gene

Pathways & Interactions for MIR5702 Gene

PathCards logo

SuperPathways for MIR5702 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR5702 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR5702 Gene

Drugs & Compounds for MIR5702 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for MIR5702 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR5702 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075E543_9606 precursor_RNA 84 4

HGNC: 43503,

RefSeq: NR_049887,

Ensembl: ENST00000582265 (view in UCSC) ,

miRBase: MI0019309,

URS000075EAC4_9606 miRNA 22 2

RefSeq: NR_049887,

miRBase: MIMAT0022495,

MIR5702 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5702 Gene

No ASD Table

Relevant External Links for MIR5702 Gene

GeneLoc Exon Structure for
MIR5702

No data available for mRNA/cDNA for MIR5702 Gene

Expression for MIR5702 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR5702 Gene

mRNA expression in normal human tissues for MIR5702 Gene
mRNA expression by GTEx for MIR5702 Gene
genes like me logo Genes that share expression patterns with MIR5702: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5702 Gene

Orthologs for MIR5702 Gene

Evolution for MIR5702 Gene

ENSEMBL:
Gene Tree for MIR5702 (if available)
TreeFam:
Gene Tree for MIR5702 (if available)

No data available for Orthologs for MIR5702 Gene

Paralogs for MIR5702 Gene

No data available for Paralogs for MIR5702 Gene

Variants for MIR5702 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional dbSNP identifiers (rs#s) for MIR5702 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR5702 Gene

Variant ID Type Subtype PubMed ID
nsv1011562 CNV loss 25217958
nsv584594 CNV gain 21841781

Additional Variant Information for MIR5702 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5702

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR5702 Gene

Disorders for MIR5702 Gene

Additional Disease Information for MIR5702

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for MIR5702 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5702 Gene

Publications for MIR5702 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

ExternalLinks

View latest publications for MIR5702 gene in Mastermind

Products for MIR5702 Gene

Sources for MIR5702 Gene