microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR5696 Gene

Subcategory (RNA class) for MIR5696 Gene

miRNA

Number of RNA Genes sources:

2 / 14

Aliases for MIR5696 Gene

  • MicroRNA 5696 2 3 5
  • Hsa-Mir-5696 3
  • MIMAT0022489 51
  • MI0019303 51
  • MIR5696 2

External Ids for MIR5696 Gene

Previous GeneCards Identifiers for MIR5696 Gene

  • GC02U902490
  • GC02P101927

Summaries for MIR5696 Gene

Entrez Gene Summary for MIR5696 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5696 Gene

MIR5696 (MicroRNA 5696) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5696 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR5696 Gene

Genomics for MIR5696 Gene

GeneHancer (GH) Regulatory Elements for MIR5696 Gene

Promoters and enhancers for MIR5696 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J101305 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -0.8 -811 7.2 EP300 HNRNPK ZBTB40 ZNF217 TCF12 NRF1 POLR2G NCOR1 GTF2E2 JUND RNF149 MIR5696 LOC105373512 SNORD89 IL1R1 MAP4K4 RPL31 lnc-TBC1D8-5
GH02J101315 Enhancer 0.2 Ensembl 0.4 +6.3 6250 1.4 piR-44253-013 SNORD89 CREG2 MIR5696
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR5696 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5696 Gene

Genomic Locations for MIR5696 Gene
chr2:101,309,450-101,309,534
(GRCh38/hg38)
Size:
85 bases
Orientation:
Plus strand
chr2:101,925,912-101,925,996
(GRCh37/hg19)
Size:
85 bases
Orientation:
Plus strand

Genomic View for MIR5696 Gene

Genes around MIR5696 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5696 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5696 Gene

Proteins for MIR5696 Gene

Post-translational modifications for MIR5696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5696 Gene

Domains & Families for MIR5696 Gene

Gene Families for MIR5696 Gene

HGNC:
genes like me logo Genes that share domains with MIR5696: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR5696 Gene

Function for MIR5696 Gene

Phenotypes From GWAS Catalog for MIR5696 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5696 Gene

Localization for MIR5696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5696 Gene

Pathways & Interactions for MIR5696 Gene

PathCards logo

SuperPathways for MIR5696 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for MIR5696 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR5696 Gene

Drugs & Compounds for MIR5696 Gene

No Compound Related Data Available

Transcripts for MIR5696 Gene

mRNA/cDNA for MIR5696 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 miRBase transcripts :
1 ENA transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5696 Gene

No ASD Table

Relevant External Links for MIR5696 Gene

GeneLoc Exon Structure for
MIR5696

Expression for MIR5696 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR5696 Gene

genes like me logo Genes that share expression patterns with MIR5696: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5696 Gene

Orthologs for MIR5696 Gene

Evolution for MIR5696 Gene

ENSEMBL:
Gene Tree for MIR5696 (if available)
TreeFam:
Gene Tree for MIR5696 (if available)

No data available for Orthologs for MIR5696 Gene

Paralogs for MIR5696 Gene

No data available for Paralogs for MIR5696 Gene

Variants for MIR5696 Gene

Additional dbSNP identifiers (rs#s) for MIR5696 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR5696 Gene

Variant ID Type Subtype PubMed ID
esv34123 CNV loss 18971310
esv3892993 CNV gain 25118596

Additional Variant Information for MIR5696 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR5696

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR5696 Gene

Disorders for MIR5696 Gene

Additional Disease Information for MIR5696

No disorders were found for MIR5696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5696 Gene

Publications for MIR5696 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3 54
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 54

Products for MIR5696 Gene

Sources for MIR5696 Gene