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Aliases for MIR5696 Gene

Subcategory (RNA class) for MIR5696 Gene


Quality Score for this RNA gene is


Aliases for MIR5696 Gene

  • MicroRNA 5696 2 3 5
  • Hsa-Mir-5696 3

External Ids for MIR5696 Gene

Previous GeneCards Identifiers for MIR5696 Gene

  • GC02U902490
  • GC02P101927

Summaries for MIR5696 Gene

Entrez Gene Summary for MIR5696 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5696 Gene

MIR5696 (MicroRNA 5696) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5696 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5696 Gene

Genomics for MIR5696 Gene

GeneHancer (GH) Regulatory Elements for MIR5696 Gene

Promoters and enhancers for MIR5696 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I101305 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -0.8 -811 7.2 HDGF SMAD1 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 IRF4 RNF149 LOC105373512 MIR5696 SNORD89 IL1R1 MAP4K4 RPL31 GC02M101274
GH02I101327 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 +20.0 20024 4.2 PKNOX1 ATF1 CLOCK MLX ARID4B NEUROD1 DMAP1 ZNF48 ZNF207 FOS RNF149 CREG2 SNORD89 MAP4K4 MIR5696 ENSG00000226058
GH02I101342 Enhancer 1 Ensembl ENCODE 0.3 +32.9 32862 0.6 ELF3 ARID4B ZNF2 RAD21 RFX5 ZNF143 RCOR1 DEK KLF11 ZNF654 CREG2 ENSG00000226058 MIR5696
GH02I101340 Enhancer 0.8 Ensembl ENCODE 0.3 +31.1 31104 1.1 PKNOX1 RXRA NFYC MAX RAD21 YY1 JUND HNF4G HNF4A MIR5696 ENSG00000226058
GH02I101348 Enhancer 0.7 ENCODE 0.3 +40.5 40529 2.7 SOX13 CTCF TFAP4 SAP130 CEBPG RAD21 TEAD3 TCF7L2 GATAD2A SOX5 CREG2 SNORD89 ENSG00000223947 ENSG00000226058 MIR5696
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR5696 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5696 Gene

Genomic Locations for MIR5696 Gene
85 bases
Plus strand

Genomic View for MIR5696 Gene

Genes around MIR5696 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5696 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5696 Gene

Proteins for MIR5696 Gene

Post-translational modifications for MIR5696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5696 Gene

Domains & Families for MIR5696 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5696 Gene

Function for MIR5696 Gene

Phenotypes From GWAS Catalog for MIR5696 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5696 Gene

Localization for MIR5696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5696 Gene

Pathways & Interactions for MIR5696 Gene

SuperPathways for MIR5696 Gene

No Data Available

Interacting Proteins for MIR5696 Gene

Gene Ontology (GO) - Biological Process for MIR5696 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5696 Gene

Drugs & Compounds for MIR5696 Gene

No Compound Related Data Available

Transcripts for MIR5696 Gene

mRNA/cDNA for MIR5696 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5696 Gene

No ASD Table

Relevant External Links for MIR5696 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5696 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR5696 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5696 Gene:

genes like me logo Genes that share expression patterns with MIR5696: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5696 Gene

Orthologs for MIR5696 Gene

Evolution for MIR5696 Gene

Gene Tree for MIR5696 (if available)
Gene Tree for MIR5696 (if available)

No data available for Orthologs for MIR5696 Gene

Paralogs for MIR5696 Gene

No data available for Paralogs for MIR5696 Gene

Variants for MIR5696 Gene

Sequence variations from dbSNP and Humsavar for MIR5696 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000413495 -- 101,308,865(+) C/T upstream_transcript_variant
rs1001019074 -- 101,307,898(+) C/A upstream_transcript_variant
rs1001554769 -- 101,307,662(+) C/T upstream_transcript_variant
rs1002570282 -- 101,308,855(+) A/C upstream_transcript_variant
rs1003577096 -- 101,307,982(+) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR5696 Gene

Variant ID Type Subtype PubMed ID
esv34123 CNV loss 18971310
esv3892993 CNV gain 25118596

Additional Variant Information for MIR5696 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5696 Gene

Disorders for MIR5696 Gene

Additional Disease Information for MIR5696

No disorders were found for MIR5696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5696 Gene

Publications for MIR5696 Gene

  1. MicroRNAs associated with metastatic prostate cancer. (PMID: 21980368) Watahiki A … Wang Y (PloS one 2011) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR5696 Gene

Sources for MIR5696 Gene

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