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Aliases for MIR567 Gene

Subcategory (RNA class) for MIR567 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR567 Gene

  • MicroRNA 567 2 3 5
  • Hsa-Mir-567 3
  • MIRN567 3

External Ids for MIR567 Gene

ORGUL Members for MIR567 Gene

Previous HGNC Symbols for MIR567 Gene

  • MIRN567

Previous GeneCards Identifiers for MIR567 Gene

  • GC03U901155
  • GC03P113316
  • GC03P111831

Summaries for MIR567 Gene

Entrez Gene Summary for MIR567 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR567 Gene

MIR567 (MicroRNA 567) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR567 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR567 Gene

Genomics for MIR567 Gene

GeneHancer (GH) Regulatory Elements for MIR567 Gene

Promoters and enhancers for MIR567 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I112111 Enhancer 0.9 ENCODE dbSUPER 550.8 -0.8 -802 0.2 CTCF EBF1 IRF4 RAD21 GATA3 POLR2A NFATC1 ZSCAN5C SMC3 ZNF143 GC03P112114 MIR567 C3orf52
GH03I112083 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11 -26.7 -26738 4.5 HDGF PKNOX1 ATF1 ARID4B SIN3A FEZF1 DMAP1 ZNF48 YY1 ZNF121 C3orf52 SLC9C1 ENSG00000261488 MIR567 ABHD10 GCSAM TMPRSS7
GH03I112634 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 9.3 +526.8 526793 10.2 PKNOX1 ZNF133 SIN3A ZNF2 POLR2B ARID2 ZNF143 FOS RUNX3 DEK CCDC80 CD200R1 ENSG00000242770 SPICE1 C3orf52 MIR567 SLC35A5 LINC01279
GH03I112494 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.4 +385.3 385332 6.3 PKNOX1 RB1 JUN IRF4 RELA POLR2A ETV6 BCLAF1 IKZF2 RUNX3 BTLA SLC35A5 CD200 MIR567 C3orf52 LOC105374041
GH03I112559 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.4 +448.8 448803 4.1 HDGF PKNOX1 CLOCK SMAD1 MLX ARNT ARID4B SIN3A DMAP1 YY1 SLC35A5 ATG3 SPICE1 NEPRO LOC101180897 CFAP44 BOC CCDC80 MIR567 C3orf52
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR567 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR567 Gene

Genomic Locations for MIR567 Gene
chr3:112,112,801-112,112,898
(GRCh38/hg38)
Size:
98 bases
Orientation:
Plus strand
chr3:111,831,648-111,831,745
(GRCh37/hg19)

Genomic View for MIR567 Gene

Genes around MIR567 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR567 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR567 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR567 Gene

Proteins for MIR567 Gene

Post-translational modifications for MIR567 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR567 Gene

Domains & Families for MIR567 Gene

Gene Families for MIR567 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR567: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR567 Gene

Function for MIR567 Gene

Phenotypes From GWAS Catalog for MIR567 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR567 Gene

Localization for MIR567 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR567 Gene

Pathways & Interactions for MIR567 Gene

SuperPathways for MIR567 Gene

No Data Available

Interacting Proteins for MIR567 Gene

Gene Ontology (GO) - Biological Process for MIR567 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR567 Gene

Drugs & Compounds for MIR567 Gene

No Compound Related Data Available

Transcripts for MIR567 Gene

mRNA/cDNA for MIR567 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR567 Gene

No ASD Table

Relevant External Links for MIR567 Gene

GeneLoc Exon Structure for
MIR567
ECgene alternative splicing isoforms for
MIR567

Expression for MIR567 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR567 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR567 Gene:

MIR567
genes like me logo Genes that share expression patterns with MIR567: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR567 Gene

Orthologs for MIR567 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR567 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-567 34
  • 94 (a)
OneToOne
Species where no ortholog for MIR567 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR567 Gene

ENSEMBL:
Gene Tree for MIR567 (if available)
TreeFam:
Gene Tree for MIR567 (if available)

Paralogs for MIR567 Gene

No data available for Paralogs for MIR567 Gene

Variants for MIR567 Gene

Sequence variations from dbSNP and Humsavar for MIR567 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000746141 -- 112,110,981(+) T/C upstream_transcript_variant
rs1000870605 -- 112,112,032(+) A/C upstream_transcript_variant
rs1004710671 -- 112,111,680(+) C/G/T upstream_transcript_variant
rs1006991782 -- 112,111,096(+) C/T upstream_transcript_variant
rs1008264933 -- 112,113,372(+) G/A downstream_transcript_variant

Additional Variant Information for MIR567 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR567

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR567 Gene

Disorders for MIR567 Gene

Additional Disease Information for MIR567

No disorders were found for MIR567 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR567 Gene

Publications for MIR567 Gene

  1. MicroRNA-567 dysregulation contributes to carcinogenesis of breast cancer, targeting tumor cell proliferation, and migration. (PMID: 28000015) Bertoli G … Castiglioni I (Breast cancer research and treatment 2017) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58
  3. The colorectal microRNAome. (PMID: 16505370) Cummins JM … Velculescu VE (Proceedings of the National Academy of Sciences of the United States of America 2006) 3 58

Products for MIR567 Gene

Sources for MIR567 Gene

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