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Aliases for MIR5590 Gene

Subcategory (RNA class) for MIR5590 Gene


Quality Score for this RNA gene is


Aliases for MIR5590 Gene

  • MicroRNA 5590 2 3 5
  • Hsa-Mir-5590 3

External Ids for MIR5590 Gene

Previous GeneCards Identifiers for MIR5590 Gene

  • GC02U902464
  • GC02P135619

Summaries for MIR5590 Gene

Entrez Gene Summary for MIR5590 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5590 Gene

MIR5590 (MicroRNA 5590) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5590 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5590 Gene

Genomics for MIR5590 Gene

GeneHancer (GH) Regulatory Elements for MIR5590 Gene

Promoters and enhancers for MIR5590 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I134838 Promoter 0.9 EPDnew 0.4 -19.2 -19223 0.1 FOXA2 RXRA TAF1 MAX REST RAD21 FOXA1 YY1 JUND ATF3 ACMSD GC02P134820 MIR5590 CCNT2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR5590 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5590 Gene

Genomic Locations for MIR5590 Gene
54 bases
Plus strand

Genomic View for MIR5590 Gene

Genes around MIR5590 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5590 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5590 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5590 Gene

Proteins for MIR5590 Gene

Post-translational modifications for MIR5590 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5590 Gene

Domains & Families for MIR5590 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5590 Gene

Function for MIR5590 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5590 Gene

Localization for MIR5590 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5590 Gene

Pathways & Interactions for MIR5590 Gene

SuperPathways for MIR5590 Gene

No Data Available

Interacting Proteins for MIR5590 Gene

Gene Ontology (GO) - Biological Process for MIR5590 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5590 Gene

Drugs & Compounds for MIR5590 Gene

No Compound Related Data Available

Transcripts for MIR5590 Gene

mRNA/cDNA for MIR5590 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5590 Gene

No ASD Table

Relevant External Links for MIR5590 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5590 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5590 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5590 Gene

Orthologs for MIR5590 Gene

Evolution for MIR5590 Gene

Gene Tree for MIR5590 (if available)
Gene Tree for MIR5590 (if available)

No data available for Orthologs for MIR5590 Gene

Paralogs for MIR5590 Gene

No data available for Paralogs for MIR5590 Gene

Variants for MIR5590 Gene

Sequence variations from dbSNP and Humsavar for MIR5590 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1002155233 -- 134,856,628(+) T/A upstream_transcript_variant
rs1007602626 -- 134,857,951(+) A/G downstream_transcript_variant
rs1008011140 -- 134,856,437(+) T/A upstream_transcript_variant
rs1008090460 -- 134,858,303(+) T/C downstream_transcript_variant
rs1008437942 -- 134,856,221(+) A/G upstream_transcript_variant

Additional Variant Information for MIR5590 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR5590 Gene

Disorders for MIR5590 Gene

Additional Disease Information for MIR5590

No disorders were found for MIR5590 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5590 Gene

Publications for MIR5590 Gene

  1. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) Friedländer MR … Rajewsky N (Nucleic acids research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR5590 Gene

Sources for MIR5590 Gene

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