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Aliases for MIR5579 Gene

Subcategory (RNA class) for MIR5579 Gene


Quality Score for this RNA gene is


Aliases for MIR5579 Gene

  • MicroRNA 5579 2 3 5
  • Hsa-Mir-5579 3

External Ids for MIR5579 Gene

Previous GeneCards Identifiers for MIR5579 Gene

  • GC11U901906
  • GC11M079136

Summaries for MIR5579 Gene

Entrez Gene Summary for MIR5579 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR5579 Gene

MIR5579 (MicroRNA 5579) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR5579 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR5579 Gene

Genomics for MIR5579 Gene

GeneHancer (GH) Regulatory Elements for MIR5579 Gene

Promoters and enhancers for MIR5579 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I079421 Enhancer 0.4 ENCODE 550.8 -0.3 -341 1.4 GLIS1 ZIC2 MIR5579 TENM4
GH11I079436 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.3 -17306 5.4 SIN3A ZNF2 GLIS2 SP3 CBX8 ZSCAN16 GLIS1 PRDM4 ZNF785 SP7 TENM4 MIR5579
GH11I079417 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.8 +3.4 3444 2.5 ZNF133 DPF2 MNT ATF2 ZNF217 CTBP1 GATA3 JUND CREB1 ATF7 TENM4 MIR5579 MIR708
GH11I079412 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +7.7 7709 3.4 ZNF146 JUND POLR2A ZSCAN5C SCRT2 ZNF8 EBF1 BATF TENM4 MIR5579 MIR708
GH11I079406 Enhancer 0.9 FANTOM5 ENCODE 0.4 +15.7 15676 0.3 BACH1 BMI1 BATF IRF4 RELA ATF7 IKZF2 RUNX3 TRIM22 CEBPB MIR708 MIR5579 TENM4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR5579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR5579 Gene

Genomic Locations for MIR5579 Gene
58 bases
Minus strand

Genomic View for MIR5579 Gene

Genes around MIR5579 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR5579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR5579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR5579 Gene

ORGUL Member Location for MIR5579 Gene

ORGUL Member Location for MIR5579 gene

Proteins for MIR5579 Gene

Post-translational modifications for MIR5579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR5579 Gene

Domains & Families for MIR5579 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR5579 Gene

Function for MIR5579 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR5579 Gene

Localization for MIR5579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR5579 Gene

Pathways & Interactions for MIR5579 Gene

SuperPathways for MIR5579 Gene

No Data Available

Interacting Proteins for MIR5579 Gene

Gene Ontology (GO) - Biological Process for MIR5579 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR5579 Gene

Drugs & Compounds for MIR5579 Gene

No Compound Related Data Available

Transcripts for MIR5579 Gene

mRNA/cDNA for MIR5579 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR5579 Gene

No ASD Table

Relevant External Links for MIR5579 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR5579 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR5579 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR5579 Gene

Orthologs for MIR5579 Gene

Evolution for MIR5579 Gene

Gene Tree for MIR5579 (if available)
Gene Tree for MIR5579 (if available)

No data available for Orthologs for MIR5579 Gene

Paralogs for MIR5579 Gene

No data available for Paralogs for MIR5579 Gene

Variants for MIR5579 Gene

Sequence variations from dbSNP and Humsavar for MIR5579 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000255313 -- 79,421,992(-) C/T downstream_transcript_variant
rs1001592832 -- 79,424,086(-) T/C upstream_transcript_variant
rs1002319138 -- 79,424,204(-) T/C upstream_transcript_variant
rs1005416906 -- 79,423,800(-) C/T upstream_transcript_variant
rs1006766682 -- 79,422,238(-) A/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR5579 Gene

Variant ID Type Subtype PubMed ID
nsv832216 CNV gain 17160897

Additional Variant Information for MIR5579 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR5579 Gene

Disorders for MIR5579 Gene

Additional Disease Information for MIR5579

No disorders were found for MIR5579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR5579 Gene

Publications for MIR5579 Gene

  1. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) Friedländer MR … Rajewsky N (Nucleic acids research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR5579 Gene

Sources for MIR5579 Gene

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