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Aliases for MIR548D1 Gene

Subcategory (RNA class) for MIR548D1 Gene


Quality Score for this RNA gene is


Aliases for MIR548D1 Gene

  • MicroRNA 548d-1 2 3
  • Hsa-Mir-548d-1 3 5
  • MIRN548D1 3

External Ids for MIR548D1 Gene

Previous HGNC Symbols for MIR548D1 Gene

  • MIRN548D1

Previous GeneCards Identifiers for MIR548D1 Gene

  • GC08M124430
  • GC08P124362
  • GC08M124364

Summaries for MIR548D1 Gene

Entrez Gene Summary for MIR548D1 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548D1 Gene

MIR548D1 (MicroRNA 548d-1) is an RNA Gene, and is affiliated with the miRNA class. Among its related pathways are miRNA targets in ECM and membrane receptors.

Additional gene information for MIR548D1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548D1 Gene

Genomics for MIR548D1 Gene

Genomic Locations for MIR548D1 Gene

Genomic Locations for MIR548D1 Gene
97 bases
Minus strand

Genomic View for MIR548D1 Gene

Genes around MIR548D1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR548D1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR548D1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548D1 Gene

No data available for GeneHancer (GH) Regulatory Elements for MIR548D1 Gene

Proteins for MIR548D1 Gene

Post-translational modifications for MIR548D1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548D1 Gene

Domains & Families for MIR548D1 Gene

Gene Families for MIR548D1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR548D1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548D1 Gene

Function for MIR548D1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR548D1 Gene

Localization for MIR548D1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR548D1 Gene

Pathways & Interactions for MIR548D1 Gene

genes like me logo Genes that share pathways with MIR548D1: view

Pathways by source for MIR548D1 Gene

1 BioSystems pathway for MIR548D1 Gene

Interacting Proteins for MIR548D1 Gene

Gene Ontology (GO) - Biological Process for MIR548D1 Gene


No data available for SIGNOR curated interactions for MIR548D1 Gene

Drugs & Compounds for MIR548D1 Gene

No Compound Related Data Available

Transcripts for MIR548D1 Gene

mRNA/cDNA for MIR548D1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548D1 Gene

No ASD Table

Relevant External Links for MIR548D1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548D1 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR548D1 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR548D1 Gene

Orthologs for MIR548D1 Gene

Evolution for MIR548D1 Gene

Gene Tree for MIR548D1 (if available)
Gene Tree for MIR548D1 (if available)

No data available for Orthologs for MIR548D1 Gene

Paralogs for MIR548D1 Gene

No data available for Paralogs for MIR548D1 Gene

Variants for MIR548D1 Gene

Sequence variations from dbSNP and Humsavar for MIR548D1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1008314582 -- 123,348,867(-) G/A upstream_transcript_variant
rs1008358328 -- 123,349,786(-) C/G upstream_transcript_variant
rs1008367078 -- 123,348,631(-) T/C upstream_transcript_variant
rs1011723122 -- 123,349,168(-) C/T upstream_transcript_variant
rs1012272925 -- 123,348,350(-) T/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR548D1 Gene

Variant ID Type Subtype PubMed ID
nsv831449 CNV loss 17160897

Additional Variant Information for MIR548D1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR548D1 Gene

Disorders for MIR548D1 Gene

Additional Disease Information for MIR548D1

No disorders were found for MIR548D1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR548D1 Gene

Publications for MIR548D1 Gene

  1. Downregulation of PPARγ by miR-548d-5p suppresses the adipogenic differentiation of human bone marrow mesenchymal stem cells and enhances their osteogenic potential. (PMID: 24929254) Sun J … Zhao G (Journal of translational medicine 2014) 3 58
  2. MicroRNA miR-548d is a superior regulator in pancreatic cancer. (PMID: 21946813) Heyn H … Beger C (Pancreas 2012) 3 58
  3. Preliminary validation of ERBB2 expression regulated by miR-548d-3p and miR-559. (PMID: 19486885) Chen H … Chen ZT (Biochemical and biophysical research communications 2009) 3 58
  4. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P … Tuschl T (Cell 2007) 3 58
  5. The colorectal microRNAome. (PMID: 16505370) Cummins JM … Velculescu VE (Proceedings of the National Academy of Sciences of the United States of America 2006) 3 58

Products for MIR548D1 Gene

Sources for MIR548D1 Gene

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