Free for academic non-profit institutions. Other users need a Commercial license

Aliases for MIR548AQ Gene

Subcategory (RNA class) for MIR548AQ Gene


Quality Score for this RNA gene is


Aliases for MIR548AQ Gene

  • MicroRNA 548aq 2 3 5
  • Hsa-Mir-548aq 3

External Ids for MIR548AQ Gene

Previous GeneCards Identifiers for MIR548AQ Gene

  • GC03U901815
  • GC03M185486

Summaries for MIR548AQ Gene

Entrez Gene Summary for MIR548AQ Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR548AQ Gene

MIR548AQ (MicroRNA 548aq) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR548AQ Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR548AQ Gene

Genomics for MIR548AQ Gene

GeneHancer (GH) Regulatory Elements for MIR548AQ Gene

Promoters and enhancers for MIR548AQ Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I185768 Enhancer 0.9 ENCODE dbSUPER 550.8 -0.8 -784 0.2 CTCF USF1 MAX RAD21 RFX5 ZNF507 CHAMP1 CC2D1A ZNF143 SMC3 MIR548AQ TRA2B TBCCD1 IGF2BP2-AS1 IGF2BP2
GH03I185766 Enhancer 0.6 Ensembl dbSUPER 550.8 +0.9 904 0.4 CTCF ZBTB40 MIR548AQ IGF2BP2 IGF2BP2-AS1
GH03I185762 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.8 +3.7 3684 2.9 SCRT1 MEIS2 PKNOX1 SOX6 ZNF10 EBF1 ZEB2 ARHGAP35 ZNF629 SCRT2 IGF2BP2-AS1 MIR548AQ IGF2BP2
GH03I185723 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +36.6 36638 15.2 ARID4B SIN3A FEZF1 IRF4 TCF12 ZNF766 GATA2 ARID2 ZNF143 FOS TRA2B VPS8 IGF2BP2-AS1 MIR548AQ IGF2BP2
GH03I185819 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.2 -55.4 -55368 7.3 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF766 FOS KLF13 SP3 SP5 IGF2BP2 IGF2BP2-AS1 MIR548AQ
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR548AQ on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR548AQ Gene

Genomic Locations for MIR548AQ Gene
58 bases
Minus strand

Genomic View for MIR548AQ Gene

Genes around MIR548AQ on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR548AQ Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR548AQ Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR548AQ Gene

ORGUL Member Location for MIR548AQ Gene

ORGUL Member Location for MIR548AQ gene

Proteins for MIR548AQ Gene

Post-translational modifications for MIR548AQ Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR548AQ Gene

Domains & Families for MIR548AQ Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR548AQ Gene

Function for MIR548AQ Gene

Phenotypes From GWAS Catalog for MIR548AQ Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR548AQ Gene

Localization for MIR548AQ Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR548AQ Gene

Pathways & Interactions for MIR548AQ Gene

SuperPathways for MIR548AQ Gene

No Data Available

Interacting Proteins for MIR548AQ Gene

Gene Ontology (GO) - Biological Process for MIR548AQ Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR548AQ Gene

Drugs & Compounds for MIR548AQ Gene

No Compound Related Data Available

Transcripts for MIR548AQ Gene

mRNA/cDNA for MIR548AQ Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR548AQ Gene

No ASD Table

Relevant External Links for MIR548AQ Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR548AQ Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR548AQ Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR548AQ Gene

Orthologs for MIR548AQ Gene

Evolution for MIR548AQ Gene

Gene Tree for MIR548AQ (if available)
Gene Tree for MIR548AQ (if available)

No data available for Orthologs for MIR548AQ Gene

Paralogs for MIR548AQ Gene

No data available for Paralogs for MIR548AQ Gene

Variants for MIR548AQ Gene

Sequence variations from dbSNP and Humsavar for MIR548AQ Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1001155488 -- 185,768,876(-) A/G upstream_transcript_variant
rs1001374456 -- 185,769,080(-) C/T upstream_transcript_variant
rs1003178351 -- 185,769,186(-) T/C upstream_transcript_variant
rs1004474948 -- 185,769,242(-) C/A upstream_transcript_variant
rs1006126762 -- 185,767,542(-) G/T downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR548AQ Gene

Variant ID Type Subtype PubMed ID
nsv1053272 CNV gain 25217958

Additional Variant Information for MIR548AQ Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR548AQ Gene

Disorders for MIR548AQ Gene

Additional Disease Information for MIR548AQ

No disorders were found for MIR548AQ Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR548AQ Gene

Publications for MIR548AQ Gene

  1. miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades. (PMID: 21911355) Friedländer MR … Rajewsky N (Nucleic acids research 2012) 3 58
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR548AQ Gene

Sources for MIR548AQ Gene

Loading form....