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Aliases for MIR544A Gene

Subcategory (RNA class) for MIR544A Gene


Quality Score for this RNA gene is


Aliases for MIR544A Gene

  • MicroRNA 544a 2 3 5
  • MicroRNA 544 2 3
  • Hsa-Mir-544a 3
  • Hsa-Mir-544 3
  • MIRN544 3
  • MIR544 3

External Ids for MIR544A Gene

ORGUL Members for MIR544A Gene

Previous HGNC Symbols for MIR544A Gene

  • MIRN544
  • MIR544

Previous GeneCards Identifiers for MIR544A Gene

  • GC14P101746
  • GC14P101785
  • GC14P101846
  • GC14P101987
  • GC14P102185
  • GC14P101260
  • GC14P101871
  • GC14P103640
  • GC14P102190
  • GC14P102359
  • GC14P102530
  • GC14P102709
  • GC14P102882
  • GC14P103055
  • GC14P103250
  • GC14P103457

Summaries for MIR544A Gene

Entrez Gene Summary for MIR544A Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR544A Gene

MIR544A (MicroRNA 544a) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR544A Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR544A Gene

Genomics for MIR544A Gene

GeneHancer (GH) Regulatory Elements for MIR544A Gene

Promoters and enhancers for MIR544A Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR544A on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR544A Gene

Genomic Locations for MIR544A Gene
91 bases
Plus strand
91 bases
Plus strand

Genomic View for MIR544A Gene

Genes around MIR544A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR544A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR544A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR544A Gene

Proteins for MIR544A Gene

Post-translational modifications for MIR544A Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR544A Gene

Domains & Families for MIR544A Gene

Gene Families for MIR544A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR544A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR544A Gene

Function for MIR544A Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR544A Gene

Localization for MIR544A Gene

Gene Ontology (GO) - Cellular Components for MIR544A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035068 micro-ribonucleoprotein complex IEA --
genes like me logo Genes that share ontologies with MIR544A: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR544A Gene

Pathways & Interactions for MIR544A Gene

PathCards logo

SuperPathways for MIR544A Gene

No Data Available

Interacting Proteins for MIR544A Gene

Gene Ontology (GO) - Biological Process for MIR544A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035195 gene silencing by miRNA IEA --
genes like me logo Genes that share ontologies with MIR544A: view

No data available for Pathways by source and SIGNOR curated interactions for MIR544A Gene

Drugs & Compounds for MIR544A Gene

No Compound Related Data Available

Transcripts for MIR544A Gene

mRNA/cDNA for MIR544A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR544A Gene

No ASD Table

Relevant External Links for MIR544A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR544A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR544A Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR544A Gene:

genes like me logo Genes that share expression patterns with MIR544A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR544A Gene

Orthologs for MIR544A Gene

This gene was present in the common ancestor of mammals.

Orthologs for MIR544A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia ptr-mir-544 35
  • 100 (a)
(Bos Taurus)
Mammalia bta-mir-544a 35
  • 98 (a)
(Canis familiaris)
Mammalia cfa-mir-544 35
  • 97 (a)
(Mus musculus)
Mammalia Mir544 35
  • 95 (a)
Species where no ortholog for MIR544A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR544A Gene

Gene Tree for MIR544A (if available)
Gene Tree for MIR544A (if available)

Paralogs for MIR544A Gene

No data available for Paralogs for MIR544A Gene

Variants for MIR544A Gene

Sequence variations from dbSNP and Humsavar for MIR544A Gene

SNP ID Clin Chr 14 pos Variation AA Info Type
rs1001499669 -- 101,048,356(+) A/G upstream_transcript_variant
rs1002444581 -- 101,046,676(+) T/C upstream_transcript_variant
rs1005375970 -- 101,048,031(+) C/T upstream_transcript_variant
rs1006688709 -- 101,047,488(+) G/C upstream_transcript_variant
rs1006923333 -- 101,047,203(+) A/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR544A Gene

Variant ID Type Subtype PubMed ID
esv3635521 CNV gain 21293372
nsv1040993 CNV gain 25217958
nsv565859 CNV gain 21841781
nsv565860 CNV gain 21841781

Additional Variant Information for MIR544A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR544A Gene

Disorders for MIR544A Gene

Additional Disease Information for MIR544A

No disorders were found for MIR544A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR544A Gene

Publications for MIR544A Gene

  1. TINCR suppresses proliferation and invasion through regulating miR-544a/FBXW7 axis in lung cancer. (PMID: 29324317) Liu X … Li L (Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie 2018) 3 58
  2. miR-144-5p Enhances the Radiosensitivity of Non-Small-Cell Lung Cancer Cells via Targeting ATF2. (PMID: 29850528) Song L … Li D (BioMed research international 2018) 3 58
  3. Rapid Generation of miRNA Inhibitor Leads by Bioinformatics and Efficient High-Throughput Screening Methods. (PMID: 27924483) Haga CL … Phinney DG (Methods in molecular biology (Clifton, N.J.) 2017) 3 58
  4. miR-544a Promotes Breast Cancer Cell Migration and Invasion Reducing Cadherin 1 Expression. (PMID: 27053345) Lu P … Qiu X (Oncology research 2016) 3 58
  5. MicroRNA-544a Regulates Migration and Invasion in Colorectal Cancer Cells via Regulation of Homeobox A10. (PMID: 27165435) Sun S … Lv Y (Digestive diseases and sciences 2016) 3 58

Products for MIR544A Gene

Sources for MIR544A Gene

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