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Aliases for MIR527 Gene

Subcategory (RNA class) for MIR527 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR527 Gene

  • MicroRNA 527 2 3 5
  • Hsa-Mir-527 3
  • MIRN527 3

External Ids for MIR527 Gene

ORGUL Members for MIR527 Gene

Previous HGNC Symbols for MIR527 Gene

  • MIRN527

Previous GeneCards Identifiers for MIR527 Gene

  • GC19P058980
  • GC19P059023
  • GC19P054257

Summaries for MIR527 Gene

Entrez Gene Summary for MIR527 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR527 Gene

MIR527 (MicroRNA 527) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR527 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR527 Gene

Genomics for MIR527 Gene

GeneHancer (GH) Regulatory Elements for MIR527 Gene

Promoters and enhancers for MIR527 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I053840 Enhancer 1.1 Ensembl ENCODE 10.5 +88.1 88111 2.7 PKNOX1 ATF1 ARNT ARID4B SIN3A ZNF143 FOS ATF7 SP3 REST LOC105372457 ENSG00000232220 PRKCG CACNG6 MIR935 MIR1283-1 MIR520A MIR515-2 MIR519C MIR515-1
GH19I053659 Enhancer 0.9 ENCODE dbSUPER 11 -92.7 -92743 2.7 ELF3 SOX13 FOXA2 SAP130 NR2F6 CREM GATAD2A SOX5 SP5 PPARG MIR515-2 MIR1283-1 MIR519C MIR520A MIR519B MIR526B MIR518F MIR520B MIR525 MIR518B
GH19I053611 Enhancer 0.9 ENCODE dbSUPER 10.8 -141.1 -141053 3.1 SOX13 ESRRA USF1 FOXA2 NEUROD1 TEAD3 CTBP1 GATA3 POLR2A NR2F6 MIR520A RNU6-698P MIR519B MIR525 MIR526B MIR518B MIR518F MIR520B MIR520C MIR526A1
GH19I053898 Enhancer 0.9 Ensembl ENCODE 10.6 +144.8 144824 1.3 KLF1 PKNOX1 BACH1 ZNF335 POLR2A PATZ1 PRDM10 KLF8 KLF13 SP3 LOC105372457 ENSG00000232324 MYADM MIR935 CACNG6 MIR520A RNU6-1041P MIR516A2 MIR519A1 RNU6-751P
GH19I053844 Enhancer 0.9 FANTOM5 Ensembl ENCODE 10.5 +91.1 91076 0.6 ZNF121 HLF CEBPB CEBPG ATF2 LOC105372457 ENSG00000232220 PRKCG MIR935 CACNG6 MIR520A MIR1283-1 MIR519C MIR515-1 MIR519E
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR527 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR527 Gene

Genomic Locations for MIR527 Gene
chr19:53,754,018-53,754,102
(GRCh38/hg38)
Size:
85 bases
Orientation:
Plus strand
chr19:54,257,272-54,257,356
(GRCh37/hg19)

Genomic View for MIR527 Gene

Genes around MIR527 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR527 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR527 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR527 Gene

Proteins for MIR527 Gene

Post-translational modifications for MIR527 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR527 Gene

Domains & Families for MIR527 Gene

Gene Families for MIR527 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR527: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR527 Gene

Function for MIR527 Gene

Gene Ontology (GO) - Molecular Function for MIR527 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:1903231 mRNA binding involved in posttranscriptional gene silencing IDA 20829195
genes like me logo Genes that share ontologies with MIR527: view

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR527 Gene

Localization for MIR527 Gene

Gene Ontology (GO) - Cellular Components for MIR527 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with MIR527: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for MIR527 Gene

Pathways & Interactions for MIR527 Gene

SuperPathways for MIR527 Gene

No Data Available

Interacting Proteins for MIR527 Gene

Gene Ontology (GO) - Biological Process for MIR527 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035195 gene silencing by miRNA IDA 20829195
genes like me logo Genes that share ontologies with MIR527: view

No data available for Pathways by source and SIGNOR curated interactions for MIR527 Gene

Drugs & Compounds for MIR527 Gene

No Compound Related Data Available

Transcripts for MIR527 Gene

mRNA/cDNA for MIR527 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR527 Gene

No ASD Table

Relevant External Links for MIR527 Gene

GeneLoc Exon Structure for
MIR527
ECgene alternative splicing isoforms for
MIR527

Expression for MIR527 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR527 Gene:

MIR527
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR527 Gene

Orthologs for MIR527 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for MIR527 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ptr-mir-527 34
  • 97 (a)
OneToOne
Species where no ortholog for MIR527 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for MIR527 Gene

ENSEMBL:
Gene Tree for MIR527 (if available)
TreeFam:
Gene Tree for MIR527 (if available)

Paralogs for MIR527 Gene

No data available for Paralogs for MIR527 Gene

Variants for MIR527 Gene

Sequence variations from dbSNP and Humsavar for MIR527 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1000312779 -- 53,752,606(+) T/C upstream_transcript_variant
rs1001398183 -- 53,753,418(+) G/A upstream_transcript_variant
rs1003969668 -- 53,752,278(+) G/A upstream_transcript_variant
rs1004160132 -- 53,754,431(+) G/A downstream_transcript_variant
rs1004211229 -- 53,752,181(+) T/C upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR527 Gene

Variant ID Type Subtype PubMed ID
esv2448351 CNV deletion 19546169
esv2718812 CNV deletion 23290073
esv2718833 CNV deletion 23290073
esv2718841 CNV deletion 23290073
nsv1058969 CNV gain 25217958
nsv458781 CNV gain 19166990
nsv580108 CNV gain 21841781
nsv961246 CNV duplication 23825009

Additional Variant Information for MIR527 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR527

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR527 Gene

Disorders for MIR527 Gene

Additional Disease Information for MIR527

No disorders were found for MIR527 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR527 Gene

Publications for MIR527 Gene

  1. ΔNp63α Silences a miRNA Program to Aberrantly Initiate a Wound-Healing Program That Promotes TGFβ-Induced Metastasis. (PMID: 26988989) Rodriguez Calleja L … Ory B (Cancer research 2016) 3 58
  2. Chemokine receptor CCR6 expression is regulated by miR-518a-5p in colorectal cancer cells. (PMID: 24559209) Rubie C … Glanemann M (Journal of translational medicine 2014) 3 58
  3. A microRNA screen to identify modulators of sensitivity to BCL2 inhibitor ABT-263 (navitoclax). (PMID: 20829195) Lam LT … Semizarov D (Molecular cancer therapeutics 2010) 3 58
  4. A mammalian microRNA expression atlas based on small RNA library sequencing. (PMID: 17604727) Landgraf P … Tuschl T (Cell 2007) 3 58
  5. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR527 Gene

Sources for MIR527 Gene

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