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Aliases for MIR4789 Gene

Subcategory (RNA class) for MIR4789 Gene


Quality Score for this RNA gene is


Aliases for MIR4789 Gene

  • MicroRNA 4789 2 3 5
  • Hsa-Mir-4789 3

External Ids for MIR4789 Gene

Previous GeneCards Identifiers for MIR4789 Gene

  • GC03U901790
  • GC03P175090

Summaries for MIR4789 Gene

Entrez Gene Summary for MIR4789 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4789 Gene

MIR4789 (MicroRNA 4789) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4789 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4789 Gene

Genomics for MIR4789 Gene

GeneHancer (GH) Regulatory Elements for MIR4789 Gene

Promoters and enhancers for MIR4789 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I175338 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -30.5 -30511 0.8 PKNOX1 FOXA2 ZSCAN4 MAX RAD21 YY1 GATA3 HNF4G FOSL2 FOS NAALADL2-AS2 MIR4789 NAALADL2
GH03I175355 Enhancer 0.6 dbSUPER 0.4 -13.6 -13594 1.1 TRIM22 EBF1 BMI1 DPF2 ZNF217 IKZF1 NBN ATF7 ZNF24 IKZF2 RNU6-1233P MIR4789 NAALADL2-AS2 NAALADL2
GH03I175386 Enhancer 0.6 ENCODE 0.4 +17.3 17267 0.2 SMARCE1 GATA3 JUND POLR2A JUN DPF2 MNT FOSL2 FOS GC03M175398 MIR4789 NAALADL2
GH03I175347 Enhancer 0.8 ENCODE dbSUPER 0.3 -22.4 -22413 0.2 ZNF687 ZNF10 ELF1 ZNF592 OSR2 ZNF217 JUND GATA3 POLR2A ZNF600 NAALADL2-AS2 MIR4789 NAALADL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4789 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4789 Gene

Genomic Locations for MIR4789 Gene
82 bases
Plus strand

Genomic View for MIR4789 Gene

Genes around MIR4789 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4789 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4789 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4789 Gene

Proteins for MIR4789 Gene

Post-translational modifications for MIR4789 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4789 Gene

Domains & Families for MIR4789 Gene

Gene Families for MIR4789 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4789: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4789 Gene

Function for MIR4789 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4789 Gene

Localization for MIR4789 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4789 Gene

Pathways & Interactions for MIR4789 Gene

SuperPathways for MIR4789 Gene

No Data Available

Interacting Proteins for MIR4789 Gene

Gene Ontology (GO) - Biological Process for MIR4789 Gene


No data available for Pathways by source and SIGNOR curated interactions for MIR4789 Gene

Drugs & Compounds for MIR4789 Gene

No Compound Related Data Available

Transcripts for MIR4789 Gene

mRNA/cDNA for MIR4789 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4789 Gene

No ASD Table

Relevant External Links for MIR4789 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for MIR4789 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4789 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4789 Gene:

genes like me logo Genes that share expression patterns with MIR4789: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4789 Gene

Orthologs for MIR4789 Gene

Evolution for MIR4789 Gene

Gene Tree for MIR4789 (if available)
Gene Tree for MIR4789 (if available)

No data available for Orthologs for MIR4789 Gene

Paralogs for MIR4789 Gene

No data available for Paralogs for MIR4789 Gene

Variants for MIR4789 Gene

Sequence variations from dbSNP and Humsavar for MIR4789 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000411580 -- 175,368,143(+) T/C upstream_transcript_variant
rs1000782566 -- 175,368,349(+) A/G upstream_transcript_variant
rs1001617444 -- 175,367,884(+) A/C upstream_transcript_variant
rs1005234974 -- 175,368,905(+) AAAAAAAA/AAAAAAA upstream_transcript_variant
rs1005266088 -- 175,368,818(+) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4789 Gene

Variant ID Type Subtype PubMed ID
nsv965410 CNV deletion 23825009
nsv829800 CNV gain+loss 17160897
nsv7356 OTHER inversion 18451855
nsv526163 CNV loss 19592680
nsv510887 OTHER complex 20534489
nsv471093 CNV loss 18288195
nsv437349 CNV loss 16327808
nsv1141980 OTHER inversion 24896259
esv3893820 CNV loss 25118596
esv3569129 CNV loss 25503493
esv2763715 CNV loss 21179565
dgv8743n54 CNV loss 21841781
dgv8739n54 CNV loss 21841781
dgv8737n54 CNV loss 21841781

Additional Variant Information for MIR4789 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4789 Gene

Disorders for MIR4789 Gene

Additional Disease Information for MIR4789

No disorders were found for MIR4789 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4789 Gene

Publications for MIR4789 Gene

  1. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx JJ … Ophoff RA (Molecular psychiatry 2014) 3 58
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR4789 Gene

Sources for MIR4789 Gene

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