microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR4738 Gene

Data sources for MIR4738 Gene:

RNA type for MIR4738 Gene

miRNA

Aliases for MIR4738 Gene

External Ids for MIR4738 Gene

Previous GeneCards Identifiers for MIR4738 Gene

  • GC17U901645
  • GC17M073784
  • GC17M075777

Summaries for MIR4738 Gene

Entrez Gene Summary for MIR4738 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4738 Gene

MIR4738 (MicroRNA 4738) is an RNA Gene, and is affiliated with the miRNA class. Diseases associated with MIR4738 include Combat Disorder. Among its related pathways are Cellular Senescence (REACTOME) and Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3.

Additional gene information for MIR4738 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR4738 Gene

Genomics for MIR4738 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR4738 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J075775 Promoter/Enhancer 2.8 UCNEbase EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +3.3 3297 12.7 LARP7 BCLAF1 SP1 ZNF207 ZNF600 NCOR1 MYC IKZF1 SIX5 SSRP1 UNK lnc-GALK1-2 SRSF2 NUP85 NT5C ENSG00000267342 TRIM65 ENSG00000266980 GGA3 ENSG00000267546
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR4738 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR4738 Gene

Latest Assembly
chr17:75,784,521-75,784,607
(GRCh38/hg38)
Size:
87 bases
Orientation:
Minus strand

Previous Assembly
chr17:73,780,602-73,780,688
(GRCh37/hg19 by Entrez Gene)
Size:
87 bases
Orientation:
Minus strand

Genomic View for MIR4738 Gene

Genes around MIR4738 on UCSC Golden Path with GeneCards custom track
MIR4738 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR4738 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4738 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4738 Gene

Proteins for MIR4738 Gene

Post-translational modifications for MIR4738 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4738 Gene

Domains & Families for MIR4738 Gene

Gene Families for MIR4738 Gene

HGNC:
genes like me logo Genes that share domains with MIR4738: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR4738 Gene

Function for MIR4738 Gene

Phenotypes From GWAS Catalog for MIR4738 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4738 Gene

Localization for MIR4738 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4738 Gene

Pathways & Interactions for MIR4738 Gene

PathCards logo

SuperPathways for MIR4738 Gene

SuperPathway Contained pathways
1 Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
2 Cellular Senescence (REACTOME)
3 Cell Cycle, Mitotic
.60
4 Mitotic Prophase
5 Meiosis
.73
genes like me logo Genes that share pathways with MIR4738: view

Gene Ontology (GO) - Biological Process for MIR4738 Gene

None

No data available for Interacting Proteins and SIGNOR curated interactions for MIR4738 Gene

Drugs & Compounds for MIR4738 Gene

No Compound Related Data Available

Transcripts for MIR4738 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR4738 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS0000299FE3_9606 miRNA 22 5

RefSeq: NR_039892,

LncBase: hsa-miR-4738-3p,

miRBase: MIMAT0019867,

TarBase: hsa-miR-4738-3p,

ENA: FR773028.1:1..22:ncRNA,

URS000075993E_9606 precursor_RNA 87 3

RefSeq: NR_039892,

Ensembl: ENST00000579134 (view in UCSC) ,

miRBase: MI0017376,

URS00000CA292_9606 miRNA 22 3

RefSeq: NR_039892,

miRBase: MIMAT0019866,

ENA: FR773029.1:1..22:ncRNA,

MIR4738 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4738 Gene

No ASD Table

Relevant External Links for MIR4738 Gene

GeneLoc Exon Structure for
MIR4738

No data available for mRNA/cDNA for MIR4738 Gene

Expression for MIR4738 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR4738 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR4738

genes like me logo Genes that share expression patterns with MIR4738: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4738 Gene

Orthologs for MIR4738 Gene

Evolution for MIR4738 Gene

ENSEMBL:
Gene Tree for MIR4738 (if available)
TreeFam:
Gene Tree for MIR4738 (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR4738

No data available for Orthologs for MIR4738 Gene

Paralogs for MIR4738 Gene

No data available for Paralogs for MIR4738 Gene

Variants for MIR4738 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR4738 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR4738 Gene

Variant ID Type Subtype PubMed ID
nsv470606 CNV loss 18288195
nsv833545 CNV gain 17160897

Additional Variant Information for MIR4738 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4738
Leiden Open Variation Database (LOVD)
MIR4738

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR4738 Gene

Disorders for MIR4738 Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR4738 Gene - From: COP

Disorder Aliases PubMed IDs
combat disorder
  • combat neurosis
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MIR4738

genes like me logo Genes that share disorders with MIR4738: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR4738 Gene

Publications for MIR4738 Gene

  1. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR4738 Gene

Sources for MIR4738 Gene