microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR4727 Gene

Subcategory (RNA class) for MIR4727 Gene

miRNA

Number of RNA Genes sources:

2 / 17

Aliases for MIR4727 Gene

  • MicroRNA 4727 2 3 5
  • Hsa-Mir-4727 2 3
  • MIR4727 2 5
  • MIMAT0019847 50
  • MIMAT0019848 50
  • MI0017364 50
  • Mir-4727 3

External Ids for MIR4727 Gene

Previous GeneCards Identifiers for MIR4727 Gene

  • GC17U901631
  • GC17P036986

Summaries for MIR4727 Gene

Entrez Gene Summary for MIR4727 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4727 Gene

MIR4727 (MicroRNA 4727) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4727 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR4727 Gene

Genomics for MIR4727 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR4727 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J038823 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 600.7 -0.8 -816 3.2 BRCA1 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 ZNF629 TFE3 CWC25 MIR4727 MED1 CDK12 SNORA21 LOC105371762 RPL23 PIP4K2B RPL19 STARD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR4727 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR4727 Gene

Genomic Locations for MIR4727 Gene
chr17:38,825,838-38,825,892
(GRCh38/hg38)
Size:
55 bases
Orientation:
Plus strand
chr17:36,982,091-36,982,145
(GRCh37/hg19)
Size:
55 bases
Orientation:
Plus strand

Genomic View for MIR4727 Gene

Genes around MIR4727 on UCSC Golden Path with GeneCards custom track
MIR4727 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR4727 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4727 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4727 Gene

Proteins for MIR4727 Gene

Post-translational modifications for MIR4727 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4727 Gene

Domains & Families for MIR4727 Gene

Gene Families for MIR4727 Gene

HGNC:
genes like me logo Genes that share domains with MIR4727: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR4727 Gene

Function for MIR4727 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4727 Gene

Localization for MIR4727 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4727 Gene

Pathways & Interactions for MIR4727 Gene

PathCards logo

SuperPathways for MIR4727 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR4727 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR4727 Gene

Drugs & Compounds for MIR4727 Gene

No Compound Related Data Available

Transcripts for MIR4727 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR4727 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075A17A_9606 precursor_RNA 55 5

HGNC: 41709,

RefSeq: NR_039880,

Ensembl: ENST00000622232 (view in UCSC) ,

miRBase: MI0017364,

ENA: LM611397.1:1..55:precursor_RNA,

URS000006A1CB_9606 miRNA 22 3

RefSeq: NR_039880,

miRBase: MIMAT0019848,

ENA: FR773011.1:1..22:ncRNA, LM382565.1:1..22:ncRNA, LM611397.1:34..55:ncRNA,

URS00005C8887_9606 miRNA 21 3

RefSeq: NR_039880,

miRBase: MIMAT0019847,

ENA: FR773012.1:1..21:ncRNA, LM611397.1:2..22:ncRNA,

MIR4727 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MIR4727 Gene

1 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4727 Gene

No ASD Table

Relevant External Links for MIR4727 Gene

GeneLoc Exon Structure for
MIR4727

Expression for MIR4727 Gene

No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4727 Gene

Orthologs for MIR4727 Gene

Evolution for MIR4727 Gene

ENSEMBL:
Gene Tree for MIR4727 (if available)
TreeFam:
Gene Tree for MIR4727 (if available)

No data available for Orthologs for MIR4727 Gene

Paralogs for MIR4727 Gene

No data available for Paralogs for MIR4727 Gene

Variants for MIR4727 Gene

Additional dbSNP identifiers (rs#s) for MIR4727 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR4727 Gene

Variant ID Type Subtype PubMed ID
nsv1146669 OTHER inversion 26484159
nsv833439 CNV loss 17160897

Additional Variant Information for MIR4727 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4727

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR4727 Gene

Disorders for MIR4727 Gene

No disorders were found for MIR4727 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4727 Gene

Publications for MIR4727 Gene

  1. miRBase: integrating microRNA annotation and deep-sequencing data. (PMID: 21037258) Kozomara A … Griffiths-Jones S (Nucleic acids research 2011) 3
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3
  3. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR4727 Gene

Sources for MIR4727 Gene