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Aliases for MIR4713 Gene

Subcategory (RNA class) for MIR4713 Gene

miRNA

Quality Score for this RNA gene is

3

Aliases for MIR4713 Gene

  • MicroRNA 4713 2 3 5
  • Hsa-Mir-4713 3

External Ids for MIR4713 Gene

Previous GeneCards Identifiers for MIR4713 Gene

  • GC15U901410
  • GC15P051538

Summaries for MIR4713 Gene

Entrez Gene Summary for MIR4713 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4713 Gene

MIR4713 (MicroRNA 4713) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4713 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4713 Gene

Genomics for MIR4713 Gene

GeneHancer (GH) Regulatory Elements for MIR4713 Gene

Promoters and enhancers for MIR4713 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I051243 Enhancer 1 FANTOM5 ENCODE 550.8 +1.7 1717 0.3 PKNOX1 NFATC3 BATF ZNF507 FOSL1 CTBP1 ZNF316 ZNF366 NFATC1 SCRT2 GC15M051242 GC15M051243 PIRC66 MIR4713 CYP19A1 GLDN SPPL2A DMXL2 PIR62978 GC15M051167
GH15I051227 Enhancer 1.1 Ensembl ENCODE 0.4 -13.7 -13701 1.4 PKNOX1 ATF1 TAF9B BATF IRF4 ATF7 FOS RCOR1 IKZF2 RUNX3 CYP19A1 MIR4713HG MIR4713 GC15M051167 TNFAIP8L3
GH15I051223 Enhancer 1 FANTOM5 Ensembl ENCODE 0.4 -18.1 -18065 2.1 PKNOX1 ZSCAN4 MAX CEBPG ZBTB40 GABPA FOSL1 JUND ZNF24 FOS CYP19A1 GLDN MIR4713HG DMXL2 SPPL2A TNFAIP8L3 MIR4713 GC15M051167
GH15I051184 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 -56.1 -56086 2.3 MEIS2 LEF1 TEAD4 TAL1 EBF1 CEBPG ZBTB40 CTBP1 NCOR1 POLR2A SPPL2A DMXL2 MIR4713HG AP4E1 MIR4713 GC15M051167 TNFAIP8L3
GH15I051162 Enhancer 1 Ensembl ENCODE 0.2 -78.9 -78901 1.1 PKNOX1 CLOCK FEZF1 RAD21 RFX5 ZNF335 ZNF143 FOS SMARCA5 ZNF654 AP4E1 MIR4713HG TNFAIP8L3 MIR4713
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4713 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4713 Gene

Genomic Locations for MIR4713 Gene
chr15:51,242,190-51,242,264
(GRCh38/hg38)
Size:
75 bases
Orientation:
Plus strand
chr15:51,534,387-51,534,461
(GRCh37/hg19)

Genomic View for MIR4713 Gene

Genes around MIR4713 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4713 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4713 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4713 Gene

Proteins for MIR4713 Gene

Post-translational modifications for MIR4713 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4713 Gene

Domains & Families for MIR4713 Gene

Gene Families for MIR4713 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4713: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4713 Gene

Function for MIR4713 Gene

Phenotypes From GWAS Catalog for MIR4713 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4713 Gene

Localization for MIR4713 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4713 Gene

Pathways & Interactions for MIR4713 Gene

SuperPathways for MIR4713 Gene

No Data Available

Interacting Proteins for MIR4713 Gene

Gene Ontology (GO) - Biological Process for MIR4713 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4713 Gene

Drugs & Compounds for MIR4713 Gene

No Compound Related Data Available

Transcripts for MIR4713 Gene

mRNA/cDNA for MIR4713 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4713 Gene

No ASD Table

Relevant External Links for MIR4713 Gene

GeneLoc Exon Structure for
MIR4713
ECgene alternative splicing isoforms for
MIR4713

Expression for MIR4713 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4713 Gene:

MIR4713
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4713 Gene

Orthologs for MIR4713 Gene

Evolution for MIR4713 Gene

ENSEMBL:
Gene Tree for MIR4713 (if available)
TreeFam:
Gene Tree for MIR4713 (if available)

No data available for Orthologs for MIR4713 Gene

Paralogs for MIR4713 Gene

No data available for Paralogs for MIR4713 Gene

Variants for MIR4713 Gene

Sequence variations from dbSNP and Humsavar for MIR4713 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1000022414 -- 51,240,843(+) T/G upstream_transcript_variant
rs1000137935 -- 51,240,574(+) G/A upstream_transcript_variant
rs1002965397 -- 51,241,240(+) G/A upstream_transcript_variant
rs1005274791 -- 51,242,351(+) G/A downstream_transcript_variant
rs1005994095 -- 51,241,650(+) T/G upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4713 Gene

Variant ID Type Subtype PubMed ID
dgv4526n54 CNV gain 21841781
esv2760031 CNV gain 17122850
esv34532 CNV gain 17911159
esv3636461 CNV gain 21293372
nsv1047443 CNV gain 25217958
nsv471243 CNV gain 18288195

Additional Variant Information for MIR4713 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4713

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4713 Gene

Disorders for MIR4713 Gene

Additional Disease Information for MIR4713

No disorders were found for MIR4713 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4713 Gene

Publications for MIR4713 Gene

  1. Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. (PMID: 22675492) Prescott J … De Vivo I (PloS one 2012) 3 58
  2. Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene. (PMID: 21199797) Persson H … Rovira C (Cancer research 2011) 3 58
  3. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen TB … Bramsen JB (RNA biology 2011) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR4713 Gene

Sources for MIR4713 Gene

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