microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR4494 Gene

Subcategory (RNA class) for MIR4494 Gene

miRNA

Number of RNA Genes sources:

1 / 17

Aliases for MIR4494 Gene

  • MicroRNA 4494 2 3 5
  • Hsa-Mir-4494 2 3
  • MIR4494 2 5
  • MIMAT0019029 50
  • MI0016856 50

External Ids for MIR4494 Gene

Previous GeneCards Identifiers for MIR4494 Gene

  • GC12U901596
  • GC12M047759

Summaries for MIR4494 Gene

Entrez Gene Summary for MIR4494 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4494 Gene

MIR4494 (MicroRNA 4494) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4494 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR4494 Gene

Genomics for MIR4494 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR4494 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J047359 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.8 2818 3.1 REST ZNF512 LEF1 IKZF1 JUND ETV6 MTA1 BRD9 DPF2 HDAC1 PCED1B HDAC7 MIR4494 LINC02416 lnc-AMIGO2-8 AMIGO2 RPAP3
GH12J047354 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 +8.1 8089 2.4 NR2C1 IKZF2 HDAC1 SOX6 EED ARID3A CEBPB CTBP1 NR2C2 MEF2D LINC02416 MIR4494 lnc-AMIGO2-8 AMIGO2 RPAP3
GH12J047353 Promoter/Enhancer 0.8 EPDnew dbSUPER 0.4 +10.5 10503 0.1 NR2C1 NR2C2 FOSL1 NR2F1 NR2F6 ATF3 LINC02416 MIR4494 lnc-AMIGO2-8 AMIGO2 RPAP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR4494 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR4494 Gene

Genomic Locations for MIR4494 Gene
chr12:47,364,186-47,364,269
(GRCh38/hg38)
Size:
84 bases
Orientation:
Minus strand
chr12:47,757,969-47,758,052
(GRCh37/hg19)
Size:
84 bases
Orientation:
Minus strand

Genomic View for MIR4494 Gene

Genes around MIR4494 on UCSC Golden Path with GeneCards custom track
MIR4494 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
MIR4494 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4494 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4494 Gene

Proteins for MIR4494 Gene

Post-translational modifications for MIR4494 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4494 Gene

Domains & Families for MIR4494 Gene

Gene Families for MIR4494 Gene

HGNC:
genes like me logo Genes that share domains with MIR4494: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR4494 Gene

Function for MIR4494 Gene

Phenotypes From GWAS Catalog for MIR4494 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4494 Gene

Localization for MIR4494 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4494 Gene

Pathways & Interactions for MIR4494 Gene

PathCards logo

SuperPathways for MIR4494 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR4494 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR4494 Gene

Drugs & Compounds for MIR4494 Gene

No Compound Related Data Available

Transcripts for MIR4494 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR4494 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075B9CB_9606 precursor_RNA 84 4

HGNC: 41731,

RefSeq: NR_039715,

Ensembl: ENST00000577654 (view in UCSC) ,

miRBase: MI0016856,

URS000075BBE0_9606 miRNA 22 2

RefSeq: NR_039715,

miRBase: MIMAT0019029,

MIR4494 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4494 Gene

No ASD Table

Relevant External Links for MIR4494 Gene

GeneLoc Exon Structure for
MIR4494

No data available for mRNA/cDNA for MIR4494 Gene

Expression for MIR4494 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for MIR4494 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for MIR4494

genes like me logo Genes that share expression patterns with MIR4494: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4494 Gene

Orthologs for MIR4494 Gene

Evolution for MIR4494 Gene

ENSEMBL:
Gene Tree for MIR4494 (if available)
TreeFam:
Gene Tree for MIR4494 (if available)

No data available for Orthologs for MIR4494 Gene

Paralogs for MIR4494 Gene

No data available for Paralogs for MIR4494 Gene

Variants for MIR4494 Gene

Additional dbSNP identifiers (rs#s) for MIR4494 Gene

Structural Variations from Database of Genomic Variants (DGV) for MIR4494 Gene

Variant ID Type Subtype PubMed ID
esv3892198 CNV gain 25118596
nsv558785 CNV gain 21841781

Additional Variant Information for MIR4494 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4494

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR4494 Gene

Disorders for MIR4494 Gene

Additional Disease Information for MIR4494

No disorders were found for MIR4494 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4494 Gene

Publications for MIR4494 Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR4494 Gene

Sources for MIR4494 Gene