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Aliases for MIR4482 Gene

Subcategory (RNA class) for MIR4482 Gene

miRNA

Quality Score for this RNA gene is

8

Aliases for MIR4482 Gene

  • MicroRNA 4482 2 3 5
  • MicroRNA 4482-1 2 3
  • Hsa-Mir-4482-1 3
  • Hsa-Mir-4482 3
  • MIR4482-1 3

External Ids for MIR4482 Gene

Previous HGNC Symbols for MIR4482 Gene

  • MIR4482-1

Previous GeneCards Identifiers for MIR4482 Gene

  • GC10U901558
  • GC10M106034

Summaries for MIR4482 Gene

Entrez Gene Summary for MIR4482 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4482 Gene

MIR4482 (MicroRNA 4482) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4482 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for MIR4482 Gene

Genomics for MIR4482 Gene

GeneHancer (GH) Regulatory Elements for MIR4482 Gene

Promoters and enhancers for MIR4482 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I104267 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.1 -124 2.8 HDGF PKNOX1 SIN3A ZNF2 BRCA1 ETS1 ZNF207 ZNF143 FOS RUNX3 GSTO2 MIR4482 PDCD11 TAF5 GSTO1 PCGF6 CFAP58 CFAP58-AS1 GC10P104302
GH10I103810 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.2 +455.3 455280 5 PKNOX1 SAP130 JUN MAX ZIC2 ZNF644 RAD21 YY1 ZNF121 HNF4G GSTO1 MIR4482 SH3PXD2A SH3PXD2A-AS1
GH10I105148 Enhancer 0.2 ENCODE 5.4 -881.1 -881117 2.2 MIR4482 GC10P105124 LOC105378465 SORCS3
GH10I104249 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +14.7 14688 7.6 FOXA2 SMAD1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 GSTO1 GSTO2 ENSG00000260461 PDCD11 CFAP58 CFAP58-AS1 GC10M104249 MIR4482
GH10I104258 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.0 7993 3 TEAD4 TAL1 JUN FOSL1 TCF12 POLR2A NCOR1 CBFA2T2 FOS TRIM24 GSTO2 GSTO1 MIR609 SFR1 SLK CFAP58 ITPRIP GC10M104249 MIR4482
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around MIR4482 on UCSC Golden Path with GeneCards custom track

Genomic Locations for MIR4482 Gene

Genomic Locations for MIR4482 Gene
chr10:104,268,336-104,268,405
(GRCh38/hg38)
Size:
70 bases
Orientation:
Minus strand
chr10:106,028,080-106,028,177
(GRCh37/hg19)

Genomic View for MIR4482 Gene

Genes around MIR4482 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
MIR4482 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4482 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4482 Gene

ORGUL Member Location for MIR4482 Gene

ORGUL Member Location for MIR4482 gene

Proteins for MIR4482 Gene

Post-translational modifications for MIR4482 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4482 Gene

Domains & Families for MIR4482 Gene

Gene Families for MIR4482 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with MIR4482: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for MIR4482 Gene

Function for MIR4482 Gene

Animal Model Products

miRNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4482 Gene

Localization for MIR4482 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4482 Gene

Pathways & Interactions for MIR4482 Gene

SuperPathways for MIR4482 Gene

No Data Available

Interacting Proteins for MIR4482 Gene

Gene Ontology (GO) - Biological Process for MIR4482 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for MIR4482 Gene

Drugs & Compounds for MIR4482 Gene

No Compound Related Data Available

Transcripts for MIR4482 Gene

mRNA/cDNA for MIR4482 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4482 Gene

No ASD Table

Relevant External Links for MIR4482 Gene

GeneLoc Exon Structure for
MIR4482
ECgene alternative splicing isoforms for
MIR4482

Expression for MIR4482 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for MIR4482 Gene

NURSA nuclear receptor signaling pathways regulating expression of MIR4482 Gene:

MIR4482
genes like me logo Genes that share expression patterns with MIR4482: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4482 Gene

Orthologs for MIR4482 Gene

Evolution for MIR4482 Gene

ENSEMBL:
Gene Tree for MIR4482 (if available)
TreeFam:
Gene Tree for MIR4482 (if available)

No data available for Orthologs for MIR4482 Gene

Paralogs for MIR4482 Gene

No data available for Paralogs for MIR4482 Gene

Variants for MIR4482 Gene

Sequence variations from dbSNP and Humsavar for MIR4482 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000877182 -- 104,269,266(-) A/C upstream_transcript_variant
rs1001644460 -- 104,268,620(-) T/C upstream_transcript_variant
rs1005955707 -- 104,268,484(-) T/G upstream_transcript_variant
rs1006029124 -- 104,268,806(-) C/A upstream_transcript_variant
rs1007453267 -- 104,268,064(-) T/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for MIR4482 Gene

Variant ID Type Subtype PubMed ID
nsv1039166 CNV loss 25217958
nsv552062 CNV loss 21841781
nsv831971 CNV gain 17160897

Additional Variant Information for MIR4482 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4482

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for MIR4482 Gene

Disorders for MIR4482 Gene

Additional Disease Information for MIR4482

No disorders were found for MIR4482 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4482 Gene

Publications for MIR4482 Gene

  1. Enhancing miRNA annotation confidence in miRBase by continuous cross dataset analysis. (PMID: 21558790) Hansen TB … Bramsen JB (RNA biology 2011) 3 58
  2. Detection of novel human MiRNAs responding to X-ray irradiation. (PMID: 21785231) Ding N … Zhou G (Journal of radiation research 2011) 3 58
  3. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3 58
  4. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3 58

Products for MIR4482 Gene

Sources for MIR4482 Gene

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