microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The ... See more...

Aliases for MIR4434 Gene

Data sources for MIR4434 Gene:

Subcategory (RNA class) for MIR4434 Gene

miRNA

Aliases for MIR4434 Gene

External Ids for MIR4434 Gene

Previous GeneCards Identifiers for MIR4434 Gene

  • GC02U902437
  • GC02P064754

Summaries for MIR4434 Gene

Entrez Gene Summary for MIR4434 Gene

  • microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]

GeneCards Summary for MIR4434 Gene

MIR4434 (MicroRNA 4434) is an RNA Gene, and is affiliated with the miRNA class.

Additional gene information for MIR4434 Gene

No data available for CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR4434 Gene

Genomics for MIR4434 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR4434 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J064522 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 250.7 -0.2 -212 5.8 CHD2 TBP MXD4 SIX5 NR2C1 MNT SMAD5 ETS1 MBD2 ZNF217 AFTPH MIR4434 VPS54 SERTAD2 AFTPH-DT LOC105374773
GH02J064534 Promoter 0.8 Ensembl 0.4 +9.2 9188 0.2 IRF4 BATF ELF1 NFATC1 IKZF1 MTA3 NR2F1 ATF2 JUNB MIXL1 AFTPH-DT MIR4434 AFTPH LOC105374773 SERTAD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR4434 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR4434 Gene

Latest Assembly
chr2:64,525,513-64,525,565
(GRCh38/hg38)
Size:
53 bases
Orientation:
Plus strand

Previous Assembly
chr2:64,752,647-64,752,699
(GRCh37/hg19 by Entrez Gene)
Size:
53 bases
Orientation:
Plus strand

Genomic View for MIR4434 Gene

Genes around MIR4434 on UCSC Golden Path with GeneCards custom track
MIR4434 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR4434 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4434 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4434 Gene

Proteins for MIR4434 Gene

Post-translational modifications for MIR4434 Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4434 Gene

Domains & Families for MIR4434 Gene

Gene Families for MIR4434 Gene

HGNC:
genes like me logo Genes that share domains with MIR4434: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR4434 Gene

Function for MIR4434 Gene

CRISPR products for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4434 Gene

Localization for MIR4434 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4434 Gene

Pathways & Interactions for MIR4434 Gene

PathCards logo

SuperPathways for MIR4434 Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR4434 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR4434 Gene

Drugs & Compounds for MIR4434 Gene

No Compound Related Data Available

Transcripts for MIR4434 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR4434 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000075DA3E_9606 precursor_RNA 53 3

RefSeq: NR_039633,

Ensembl: ENST00000637066 (view in UCSC) ,

miRBase: MI0016774,

URS000075CBBF_9606 miRNA 18 2

RefSeq: NR_039633,

miRBase: MIMAT0018950,

MIR4434 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4434 Gene

No ASD Table

Relevant External Links for MIR4434 Gene

GeneLoc Exon Structure for
MIR4434

No data available for mRNA/cDNA for MIR4434 Gene

Expression for MIR4434 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4434 Gene

Orthologs for MIR4434 Gene

Evolution for MIR4434 Gene

ENSEMBL:
Gene Tree for MIR4434 (if available)
TreeFam:
Gene Tree for MIR4434 (if available)

No data available for Orthologs for MIR4434 Gene

Paralogs for MIR4434 Gene

No data available for Paralogs for MIR4434 Gene

Variants for MIR4434 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR4434 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Structural Variations from Database of Genomic Variants (DGV) for MIR4434 Gene

Variant ID Type Subtype PubMed ID
nsv1006553 CNV gain 25217958
nsv2754 CNV insertion 18451855
nsv582127 CNV gain 21841781
nsv7313 OTHER inversion 18451855
nsv834245 CNV gain 17160897

Additional Variant Information for MIR4434 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4434

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for MIR4434 Gene

Disorders for MIR4434 Gene

Additional Disease Information for MIR4434

No disorders were found for MIR4434 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for MIR4434 Gene

Publications for MIR4434 Gene

  1. Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs. (PMID: 20733160) Jima DD … Hematologic Malignancies Research Consortium (Blood 2010) 3
  2. miRBase: microRNA sequences, targets and gene nomenclature. (PMID: 16381832) Griffiths-Jones S … Enright AJ (Nucleic acids research 2006) 3

Products for MIR4434 Gene

Sources for MIR4434 Gene