Aliases for MIR4422HG Gene

Data sources for MIR4422HG Gene:

RNA type for MIR4422HG Gene

lncRNA

Aliases for MIR4422HG Gene

External Ids for MIR4422HG Gene

Summaries for MIR4422HG Gene

GeneCards Summary for MIR4422HG Gene

MIR4422HG (MIR4422 Host Gene) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with MIR4422HG include Parkinson Disease, Late-Onset.

Additional gene information for MIR4422HG Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for MIR4422HG Gene

Genomics for MIR4422HG Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for MIR4422HG Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J055190 Enhancer 1.2 Ensembl ENCODE dbSUPER 12.4 -24.8 -24843 11.2 IKZF1 ZNF600 NCOR1 ATF2 CEBPA NFIC ZIC2 REST CEBPB FOXA1 USP24 MIR4422HG GYG1P3 LOC100507634 HSALNG0003822 PCSK9
GH01J055210 Promoter/Enhancer 2.1 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -3.1 -3070 8.1 ZNF207 NCOR1 MYC ZNF600 IKZF1 ZNF592 POLR2A CEBPA NFIC ZIC2 USP24 LOC100507634 SSBP3-AS1 RPSAP20 MIR4422HG HSALNG0003822 PCSK9
GH01J055233 Enhancer 0.8 Ensembl 0.4 +16.3 16257 1.4 ZNF592 YY1 FOXA1 THAP11 FOXA2 RXRA SAP130 TEAD3 JUND FOSL2 piR-61945-024 USP24 MIR4422 MIR4422HG
GH01J055257 Enhancer 0.8 Ensembl ENCODE 0.3 +42.0 41957 5.2 EBF1 TAL1 NR2F6 MTA3 ATF2 CREM CREB1 IKZF1 ATF1 SPI1 USP24 HSALNG0003824-001 piR-61945-024 MIR4422HG
GH01J055288 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.2 +70.1 70057 2.2 SP1 ZNF207 BCL11A ZNF592 TRIM22 IRF2 IRF4 EBF1 ZBTB5 BHLHE40 USP24 piR-43107-011 ENSG00000234810 MIR4422HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around MIR4422HG on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for MIR4422HG Gene

Latest Assembly
chr1:55,217,644-55,325,739
(GRCh38/hg38)
Size:
108,096 bases
Orientation:
Plus strand

Previous Assembly
chr1:55,683,534-55,699,850
(GRCh37/hg19 by Entrez Gene)
Size:
16,317 bases
Orientation:
Plus strand

chr1:55,683,534-55,699,850
(GRCh37/hg19 by Ensembl)
Size:
16,317 bases
Orientation:
Plus strand

Genomic View for MIR4422HG Gene

Genes around MIR4422HG on UCSC Golden Path with GeneCards custom track
MIR4422HG in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
MIR4422HG Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for MIR4422HG Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for MIR4422HG Gene

Proteins for MIR4422HG Gene

Post-translational modifications for MIR4422HG Gene

No Post-translational modifications

No data available for DME Specific Peptides for MIR4422HG Gene

Domains & Families for MIR4422HG Gene

Gene Families for MIR4422HG Gene

genes like me logo Genes that share domains with MIR4422HG: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for MIR4422HG Gene

Function for MIR4422HG Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for MIR4422HG Gene

Localization for MIR4422HG Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for MIR4422HG Gene

Pathways & Interactions for MIR4422HG Gene

PathCards logo

SuperPathways for MIR4422HG Gene

No Data Available

Gene Ontology (GO) - Biological Process for MIR4422HG Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for MIR4422HG Gene

Drugs & Compounds for MIR4422HG Gene

No Compound Related Data Available

Transcripts for MIR4422HG Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for MIR4422HG Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS000045BECC_9606 lncRNA 640 5

RefSeq: NR_146283,

Ensembl: ENST00000451250 (view in UCSC) ,

LncBook: HSALNT0007124,

LNCipedia: MIR4422HG:4,

NONCODE: NONHSAT003409.2,

URS0000D64E60_9606 lncRNA 2004 2

Ensembl: ENST00000643232 (view in UCSC) ,

LNCipedia: MIR4422HG:2,

URS00009B12E5_9606 lncRNA 638 2

LncBook: HSALNT0007125,

NONCODE: NONHSAT148981.1,

URS0001BD2B4A_9606 lncRNA 4525 1

LncBook: HSALNT0007138,

URS0001BEEDC0_9606 lncRNA 3051 1

LncBook: HSALNT0007123,

MIR4422HG in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for MIR4422HG Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for MIR4422HG Gene

No ASD Table

Relevant External Links for MIR4422HG Gene

GeneLoc Exon Structure for
MIR4422HG

Expression for MIR4422HG Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for MIR4422HG Gene

Orthologs for MIR4422HG Gene

Evolution for MIR4422HG Gene

ENSEMBL:
Gene Tree for MIR4422HG (if available)
TreeFam:
Gene Tree for MIR4422HG (if available)
Alliance of Genome Resources:
Additional Orthologs for MIR4422HG

No data available for Orthologs for MIR4422HG Gene

Paralogs for MIR4422HG Gene

No data available for Paralogs for MIR4422HG Gene

Variants for MIR4422HG Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for MIR4422HG Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for MIR4422HG Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
MIR4422HG
Leiden Open Variation Database (LOVD)
MIR4422HG

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for MIR4422HG Gene

Disorders for MIR4422HG Gene

MalaCards: The human disease database

(1) MalaCards diseases for MIR4422HG Gene - From: LNC

Disorder Aliases PubMed IDs
parkinson disease, late-onset
  • pd
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for MIR4422HG

genes like me logo Genes that share disorders with MIR4422HG: view

No data available for UniProtKB/Swiss-Prot and Genatlas for MIR4422HG Gene

Publications for MIR4422HG Gene

  1. Discovery and validation of immune-associated long non-coding RNA biomarkers associated with clinically molecular subtype and prognosis in diffuse large B cell lymphoma. (PMID: 28103885) Zhou M … Sun J (Molecular cancer 2017) 2 3
  2. Long non-coding RNA and alternative splicing modulations in Parkinson's leukocytes identified by RNA sequencing. (PMID: 24651478) Soreq L … Soreq H (PLoS computational biology 2014) 72

Products for MIR4422HG Gene

Sources for MIR4422HG Gene